[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,101 items for (author: lore & k)

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ

EMDB-56861:
In situ ribosome from HeLa cells
Method: subtomogram averaging / : Gemin O, Babenko A, Papp G

EMDB-54283:
Human UAP56-RNA - SAC3D1-PCID2-SEM1 complex, Map A
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-54284:
Map B of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-54282:
Cryo-EM structure of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56930:
Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56931:
Cryo-EM structure of the human LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56932:
Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56933:
Cryo-EM structure of the human UAP56-RNA - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28wy:
Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28wz:
Cryo-EM structure of the human LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28xa:
Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-28xb:
Cryo-EM structure of the human UAP56-RNA - LENG8-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

PDB-9rv1:
Cryo-EM structure of the human UAP56-RNA - SAC3D1-PCID2-SEM1 complex
Method: single particle / : Hohmann U, Graf M, Plaschka C

EMDB-56607:
CryoEM structure of guanidinase from Nitrospira inopinata
Method: single particle / : Prokhorova I, Lecomte L, Papp G, Schreiner C, Djinovic-Carugo K

EMDB-56821:
C.t. INO80 chromatin remodeler bound to nucleosome
Method: single particle / : Lecomte L, Grozavu DM, Kolesnikova O, Eustermann S

EMDB-56855:
Cryo-EM structure of yeast ribosome solved with EasyGrid
Method: single particle / : Gemin O, Papp G

EMDB-54346:
high-affinity choline transporter in DDM with Na+ and choline
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

EMDB-54347:
high-affinity choline transporter in DDM with Na+
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

PDB-9rws:
high-affinity choline transporter in DDM with Na+ and choline
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

PDB-9rwt:
high-affinity choline transporter in DDM with Na+
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

EMDB-54052:
Cryo-EM structure of alphaM/beta2 headpiece complex without alphaM I-domain - the consensus map from alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

PDB-9rm9:
Cryo-EM structure of alphaM/beta2 headpiece complex without alphaM I-domain - the consensus map from alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

EMDB-75290:
cryoEM map for soluble OmpA beta-barrel WRAPs
Method: single particle / : Courbet A, Mihaljevic L

EMDB-75291:
cryoEM map of OmpA helical WRAP
Method: single particle / : Courbet A, Mihaljevic L

EMDB-74399:
Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology
Method: helical / : Nguyen BA, Ahmed Y, Saelices L

PDB-9zld:
Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology
Method: helical / : Nguyen BA, Ahmed Y, Saelices L

EMDB-66042:
Open State of Apo-P-Glycoprotein
Method: single particle / : Hamaguchi-Suzuki N, Kanaoka Y, Ogasawara S, Murata T, Uchihashi T

EMDB-66043:
Closed State of Apo-P-Glycoprotein.
Method: single particle / : Hamaguchi-Suzuki N, Kanaoka Y, Ogasawara S, Murata T, Uchihashi T

EMDB-70624:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70625:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70627:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-75014:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omy:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omz:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9on2:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9zzr:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-75641:
Full-length BG505 HIV-1 Env expressed in VLP
Method: subtomogram averaging / : Duquette M, Villa E

EMDB-56567:
Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA
Method: single particle / : Waltz F, Kater L, Engel BD

EMDB-56602:
Structure of the Chlamydomonas reinhardtii chlororibosome with factor pY
Method: single particle / : Waltz F, Kater L, Engel BD

PDB-28jw:
Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA
Method: single particle / : Waltz F, Kater L, Engel BD

PDB-28lu:
Structure of the Chlamydomonas reinhardtii chlororibosome with factor pY
Method: single particle / : Waltz F, Kater L, Engel BD

EMDB-54053:
Cryo-EM structure of alphaM I-domain:C3d-anti-CR3-Nb complex focused refinement from the alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

EMDB-55521:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO2 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55596:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO1 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55597:
Cryo-EM structure of mutant R61H alphaM/beta2 headpiece complex
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55599:
Cryo-EM structure of alphaM/beta2:MEM148-Fab headpiece complex (without alphaM I-domain)
Method: single particle / : Lorentzen J, Andersen GR

PDB-9rma:
Cryo-EM structure of alphaM I-domain:C3d-anti-CR3-Nb complex focused refinement from the alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

PDB-9t3y:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO2 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more