[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 206 items for (author: li & yx)

EMDB-63124:
The cryo-EM structure of amyloid fibrils from abdominal fat of an AL amyloidosis patient (case 1) - polymorph 1.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63125:
The cryo-EM structure of amyloid fibrils from heart of an AL amyloidosis patient (case 1) - polymorph 1.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63126:
The cryo-EM structure of amyloid fibrils from abdominal fat of an AL amyloidosis patient (case 2) - polymorph 1.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63127:
The cryo-EM structure of amyloid fibrils from abdominal fat of an AL amyloidosis patient (case 2) - polymorph 2.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63129:
The cryo-EM structure of amyloid fibrils from abdominal fat of an AL amyloidosis patient (case 3).
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-66676:
The cryo-EM structure of amyloid fibrils from abdominal fat of an AL amyloidosis patient (case 2) - polymorph 3
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-66772:
Cryo-EM map of influenza polymerase bound to the cRNA promoter
Method: single particle / : Wu YX, Liang HH

EMDB-63141:
The cryo-EM structure of amyloid fibrils from abdominal fat of a multiple myeloma patient (case 1)- polymorph 2.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63140:
The cryo-EM structure of amyloid fibrils from abdominal fat of a multiple myeloma patient (case 1)- polymorph 1.
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-63142:
The cryo-EM structure of amyloid fibrils from abdominal fat of a multiple myeloma patient (case 2).
Method: helical / : Yao YX, Zhao QY, Liu C, Li D

EMDB-62509:
cryo-EM structure of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome
Method: single particle / : Deng ZH, Ai HS, Liu L

EMDB-63119:
The cryo-EM structure of the native PMEL fibril lamella
Method: single particle / : Ma BY, Yao YX, Dong H, Li D, Liu C

EMDB-63948:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63949:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-62510:
Cryo-EM map of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome (4.58 angstrom)
Method: single particle / : Deng ZH, Ai HS, Liu L

EMDB-62995:
Inactive TOD6 with AC DNA substrate
Method: single particle / : Mi L, Lv XC, Lu PL

EMDB-62996:
Inactivate TOD6 with TC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62997:
Inactivate TOD6 with GC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62998:
Inactivate TOD6 with CC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-62999:
Inactivate TOD4 with TC DNA substrate
Method: single particle / : Lv XC, Mi L, Lu PL

EMDB-47731:
(Apo)Alpha-synuclein fibril structures from MSA patient brain
Method: helical / : Lu J, Sawaya MR, Ge P, Boyer DR, Eisenberg DS

EMDB-47732:
Complex fibril structure of MSA alpha-synuclein with CNS-11g at 4 hours
Method: helical / : Lu J, Sawaya MR, Ge P, Boyer DR, Eisenberg DS

EMDB-47733:
Complex fibril structure of MSA alpha-synuclein with CNS-11g at 6 hours
Method: helical / : Lu J, Sawaya MR, Ge P, Boyer DR, Eisenberg DS

EMDB-47734:
Complex fibril structure of MSA alpha-synuclein with CNS-11g at 10 hours
Method: helical / : Lu J, Sawaya MR, Ge P, Boyer DR, Eisenberg DS

EMDB-47735:
Complex fibril structure of MSA alpha-synuclein with CNS-11g at 15 hours
Method: helical / : Lu J, Sawaya MR, Ge P, Boyer DR, Eisenberg DS

EMDB-47736:
CNS-11g alone fibril
Method: helical / : Lu J, Sawaya MR

EMDB-62490:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62491:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in UQ1-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62495:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in pydiflumetofen-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-63115:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in Y19315-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-61161:
Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B homodimer
Method: single particle / : Dai Z, Liang L, Yin YX

EMDB-61162:
Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B homodimer complexed with FNIP1 degron
Method: single particle / : Dai Z, Liang L, Yin YX

EMDB-61691:
the wild-type human PRMT1 filament
Method: single particle / : Li YW, Ru YX

EMDB-60663:
SARS-CoV-2 E-RTC bound to pRNA-nsp9 and GDP-BeF3-
Method: single particle / : Yan LM, Huang YC, Liu YX, Rao ZH, Lou ZY

EMDB-60676:
The Cryo-EM structure of MPXV E5 in the apo state
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60677:
The Cryo-EM structure of MPXV E5 in complex with ssDNA
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60678:
The Cryo-EM structure of MPXV E5 in complex with ssDNA focused on primase and Zn binding domain
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60679:
The Cryo-EM structure of MPXV E5 in complex with ssDNA in intermediate state 1
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60680:
The Cryo-EM structure of MPXV E5 in complex with ssDNA in intermediate state 3
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60681:
The Cryo-EM map of MPXV E5 in complex with ssDNA in intermediate state 2
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60682:
The Cryo-EM map of MPXV E5 in complex with ssDNA in intermediate state 4
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60683:
The Cryo-EM map of MPXV E5 in complex with ssDNA in intermediate state 5
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-60684:
The Cryo-EM structure of MPXV E5 head-to-head double hexamer conformation
Method: single particle / : Cheng YX, Han P, Wang H

EMDB-64175:
SARS-CoV-2 E-RTC in complex with RNA-nsp9 and GMPPNP
Method: single particle / : Huang YC, Liu YX, Lou ZY, Rao ZH, Yan LM

EMDB-60594:
Cryo-EM structure of hetero-bacterioferritin SoBfr12 from Shewanella oneidensis
Method: single particle / : Gao HC, Chen JH, Li YX

EMDB-62692:
SARS-CoV-2 C-RTC with 13-TP
Method: single particle / : Huang YC, Liang L, Liu YX, Yan LM, Lou ZY, Rao ZH

EMDB-44181:
Filament of D-TLKIVWI, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments, determined by Cryo-EM
Method: helical / : Hou K, Ge P, Sawaya MR, Eisenberg DS

EMDB-44182:
Filament of D-TLKIVWS, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments, determined by Cryo-EM
Method: helical / : Hou K, Ge P, Sawaya MR, Eisenberg DS

EMDB-44183:
Filament of D-TLKIVWR, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments, determined by Cryo-EM
Method: helical / : Hou K, Ge P, Sawaya MR, Eisenberg DS

EMDB-44184:
Filament of Tau in complex with D-TLKIVWI, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments, determined by Cryo-EM
Method: helical / : Hou K, Ge P, Sawaya MR, Eisenberg DS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more