[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 16,229 items for (author: li & q)

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-63974:
Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in the presence of nitrate
Method: single particle / : Li QY, Li B, Zhou CZ, Jiang YL

EMDB-63975:
Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in complex with ATP
Method: single particle / : Li QY, Li B, Zhou CZ, Jiang YL

PDB-9ua0:
Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in the presence of nitrate
Method: single particle / : Li QY, Li B, Zhou CZ, Jiang YL

PDB-9ua1:
Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in complex with ATP
Method: single particle / : Li QY, Li B, Zhou CZ, Jiang YL

EMDB-76370:
Rat 80S ribosome purified from brain RNA granules at 10 mM Magnesium. Class 1 80S with AP and PE tRNAs
Method: single particle / : Ortega J, Sun J

EMDB-76379:
Rat 80S ribosome purified from brain RNA granules at 10 mM Magnesium. Class 2 80S with PP tRNA
Method: single particle / : Ortega J, Sun J

EMDB-63943:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65595:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65839:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-68472:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-22mm:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-9u7r:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9w39:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9wbg:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-51861:
dCas9 bound to on-target EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51862:
dCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51863:
dCas9 bound to off-target 2 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51864:
wtCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4j:
dCas9 bound to on-target EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4k:
dCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4l:
dCas9 bound to off-target 2 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4m:
wtCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-65282:
Cryo-EM structure of ATP-bound Oryza sativa MRP5 with E1424Q mutation
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65283:
Cryo-EM structure of Oryza sativa multidrug resistance protein 5 (MRP5)
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65284:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state A
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65285:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state B
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrb:
Cryo-EM structure of ATP-bound Oryza sativa MRP5 with E1424Q mutation
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrc:
Cryo-EM structure of Oryza sativa multidrug resistance protein 5 (MRP5)
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrd:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state A
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vre:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state B
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-64755:
Nav1.5 in complex with quinidine-azo
Method: single particle / : Huang Z, Li Z, Liu S

PDB-9v3s:
Nav1.5 in complex with quinidine-azo
Method: single particle / : Huang Z, Li Z, Liu S

EMDB-64823:
PSI-LHCE supercomplex from Euglena gracilis
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-64824:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7t:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7u:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-65106:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

EMDB-65107:
Raw consensus map of Type II-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65108:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65109:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vj8:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

PDB-9vj9:
Type I-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vja:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vjb:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more