[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,766 items for (author: li & pp)

EMDB-52020:
Cryo-EM consensus map of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52021:
Cryo-EM focused refined map of the canine distemper virus dimer II region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52023:
Cryo-EM focused refined map of the canine distemper virus dimer I region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52024:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

PDB-9hbp:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-70507:
HCoV-229E S2P bound by one DH1533 Fab, consensus map
Method: single particle / : Wrapp D

EMDB-70508:
HCoV-229E S2P bound by one DH1533 Fab, focused map
Method: single particle / : Wrapp D

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

EMDB-54112:
CryoEM structure of the microtubule-AKAP13 C1 domain complex
Method: single particle / : Giono M, Choi SR, Filipcik P, Steinmetz MO

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-50618:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50622:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50625:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50634:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50715:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-53711:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fo6:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fog:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fok:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fp3:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9frj:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9r75:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-49930:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49931:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49932:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49933:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49935:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-intermediate state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyc:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyd:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nye:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyf:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more