[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 85 items for (author: lawrence & mc)

EMDB-44246:
Cryo-EM structure of HIV-1 JRFL v6 Env in complex with vaccine-elicited, Membrane Proximal External Region (MPER) directed antibody DH1317.4.

EMDB-43529:
L5A7 Fab bound to Indonesia2005 Hemagglutinin

EMDB-43545:
L5A7 Fab bound to 28H6E11 anti-idiotype Fab

PDB-8vue:
L5A7 Fab bound to Indonesia2005 Hemagglutinin

PDB-8vuz:
L5A7 Fab bound to 28H6E11 anti-idiotype Fab

EMDB-40815:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, N611 and base from participant 017

EMDB-40816:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 03

EMDB-40817:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 07

EMDB-40818:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp120-GH and base from participant 09

EMDB-40819:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, gp41-GH/FP and base from participant 11

EMDB-43658:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs

EMDB-43659:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement

EMDB-43660:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement

PDB-8vye:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs

PDB-8vyf:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement

PDB-8vyg:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement

EMDB-43542:
ELIC5 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc in open conformation

PDB-8vuw:
ELIC5 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc in open conformation

EMDB-29725:
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

EMDB-29731:
Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

PDB-8g4m:
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

PDB-8g4t:
Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

EMDB-26157:
Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9

EMDB-29209:
Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664

PDB-8fis:
Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664

EMDB-26044:
H10ssF: ferritin-based nanoparticle displaying H10 hemagglutinin stabilized stem epitopes

EMDB-27215:
ELIC apo in POPC nanodisc

EMDB-27216:
ELIC with cysteamine in POPC nanodisc

EMDB-27217:
ELIC apo in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-27218:
ELIC with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-27219:
ELIC3 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

PDB-8d63:
ELIC apo in POPC nanodisc

PDB-8d64:
ELIC with cysteamine in POPC nanodisc

PDB-8d65:
ELIC apo in 2:1:1 POPC:POPE:POPG nanodisc

PDB-8d66:
ELIC with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

PDB-8d67:
ELIC3 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-26306:
Single-chain LCDV-1 viral insulin-like peptide bound to IGF-1R ectodomain, leucine-zippered form

EMDB-26363:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM459

EMDB-26364:
Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM462

EMDB-24791:
Head region of a complex of IGF-I with the ectodomain of a hybrid insulin receptor / type 1 insulin-like growth factor receptor

EMDB-24927:
Leg region of a complex of IGF-I with the ectodomain of a hybrid insulin receptor / type 1 insulin-like growth factor receptor

EMDB-23949:
The insulin receptor ectodomain in complex with a venom hybrid insulin analog - "head" region

EMDB-23950:
The insulin receptor ectodomain in complex with four venom hybrid insulins - symmetric conformation

EMDB-23951:
The insulin receptor ectodomain in complex with three venom hybrid insulin molecules - asymmetric conformation

EMDB-23480:
Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664

PDB-7lpn:
Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664

EMDB-22302:
Cryo-EM Structure of Vaccine-Elicited Rhesus Antibody 789-203-3C12 in Complex with Stabilized SI06 (A/Solomon Islands/3/06) Influenza Hemagglutinin Trimer

PDB-6xsk:
Cryo-EM Structure of Vaccine-Elicited Rhesus Antibody 789-203-3C12 in Complex with Stabilized SI06 (A/Solomon Islands/3/06) Influenza Hemagglutinin Trimer

EMDB-21415:
Head region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

EMDB-21416:
Leg region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlc1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more