[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 173 items for (author: kowal & j)

EMDB-54220:
Cryo-EM structure of MATE transporter NorM-VC in complex with doxorubicin
Method: single particle / : Romane K, Hsieh PY, Kowal J, Locher KP, van Veen HW

PDB-9rsj:
Cryo-EM structure of MATE transporter NorM-VC in complex with doxorubicin
Method: single particle / : Romane K, Hsieh PY, Kowal J, Locher KP, van Veen HW

EMDB-53489:
Cryo-EM structure of human MATE1 in complex with cimetidine
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53506:
Cryo-EM structure of human MATE1 in complex with MPP
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53507:
Cryo-EM structure of human MATE1 in complex with metformin
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-53508:
Cryo-EM structure of human MATE1
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r10:
Cryo-EM structure of human MATE1 in complex with cimetidine
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1e:
Cryo-EM structure of human MATE1 in complex with MPP
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1f:
Cryo-EM structure of human MATE1 in complex with metformin
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

PDB-9r1g:
Cryo-EM structure of human MATE1
Method: single particle / : Romane K, Peteani G, Mukherjee S, Kowal J, Rossi L, Hou J, Kossiakoff A, Lemmin T, Locher KP

EMDB-52412:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in complex with heparin oligomer (20 subunits) in 0.1 mM calcium
Method: single particle / : Bereta GP, Bielecka E, Biela AP, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

EMDB-52413:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in 10 mM calcium
Method: single particle / : Bereta GP, Bielecka E, Biela AP, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

EMDB-52414:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in complex with heparin oligomer (20 subunits).
Method: single particle / : Bereta G, Bielecka E, Biela A, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

EMDB-52415:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in complex with heparin oligomer (12 subunits)
Method: single particle / : Bereta GP, Bielecka E, Biela AP, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

PDB-9huh:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in 10 mM calcium
Method: single particle / : Bereta GP, Bielecka E, Biela AP, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

PDB-9hui:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in complex with heparin oligomer (20 subunits).
Method: single particle / : Bereta G, Bielecka E, Biela A, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

PDB-9huj:
CryoEM structure of human peptidylarginine deiminase type 4 (PAD4) in complex with heparin oligomer (12 subunits)
Method: single particle / : Bereta GP, Bielecka E, Biela AP, Wilk P, Wator-Wilk E, Grudnik P, Kantyka T

EMDB-50173:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

EMDB-50217:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

PDB-9f3f:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

PDB-9f67:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

EMDB-50026:
CryoEM structure of human MICAL1
Method: single particle / : Schrofel A, Pinkas D, Novacek J, Rozbesky D

PDB-9ewy:
CryoEM structure of human MICAL1
Method: single particle / : Schrofel A, Pinkas D, Novacek J, Rozbesky D

EMDB-18003:
ABCG2 in complex with AZ99 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Tajkhorshid E, Altmann KH, Locher KP

EMDB-18016:
ABCG2 in complex with ko143 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Tajkhorshid E, Altmann KH, Locher KP

EMDB-18210:
ABCG2 in complex with MZ29 and 5D3 Fab
Method: single particle / : Kowal J, Yu Q, Ni D, Stahlberg H, Tajkhorshid E, Altmann KH, Locher KP, Manolaridis I, Jackson SM, Taylor NMI, Zechner M

EMDB-18330:
ABCG2 in complex with MZ82 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Ni D, Stahlberg H, Tajkhorshid E, Altmann KH, Locher KP

PDB-8pxo:
ABCG2 in complex with AZ99 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Tajkhorshid E, Altmann KH, Locher KP

PDB-8py4:
ABCG2 in complex with ko143 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Tajkhorshid E, Altmann KH, Locher KP

PDB-8q7b:
ABCG2 in complex with MZ29 and 5D3 Fab
Method: single particle / : Kowal J, Yu Q, Ni D, Stahlberg H, Tajkhorshid E, Altmann KH, Locher KP, Manolaridis I, Jackson SM, Taylor NMI, Zechner M

PDB-8qcm:
ABCG2 in complex with MZ82 and 5D3 Fab
Method: single particle / : Yu Q, Kowal J, Ni D, Stahlberg H, Tajkhorshid E, Altmann KH, Locher KP

EMDB-17779:
Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1
Method: single particle / : Ramirez AS, Kowal J, Locher KP

PDB-8pn9:
Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1
Method: single particle / : Ramirez AS, Kowal J, Locher KP

PDB-8yy8:
Fzd7 -Gs complex
Method: single particle / : Chen B, Xu L, Han GW, Xu F

EMDB-19687:
GroEL with bound GroTAC peptide
Method: single particle / : Wroblewski K, Izert-Nowakowska MA, Goral TK, Klimecka MM, Kmiecik S, Gorna MW

PDB-8s32:
GroEL with bound GroTAC peptide
Method: single particle / : Wroblewski K, Izert-Nowakowska MA, Goral TK, Klimecka MM, Kmiecik S, Gorna MW

EMDB-15525:
Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Method: helical / : Perry TN, Fronzes R, Polard P, Hertzog M

PDB-8amf:
Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Method: helical / : Perry TN, Fronzes R, Polard P, Hertzog M

EMDB-17195:
CryoEM reconstruction of a TRAP protein cage made out of 12 11-membered rings
Method: single particle / : Biela AP

EMDB-17196:
Structure of the protein cage composed of 12 identical 12-membered protein rings
Method: single particle / : Biela AP

EMDB-17761:
Vanadate-trapped BSEP in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

PDB-8pmj:
Vanadate-trapped BSEP in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

EMDB-17758:
Human bile salt export pump (BSEP) in complex with inhibitor GBM in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

EMDB-17759:
Nucleotide-bound BSEP in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

PDB-8pm6:
Human bile salt export pump (BSEP) in complex with inhibitor GBM in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

PDB-8pmd:
Nucleotide-bound BSEP in nanodiscs
Method: single particle / : Liu H, Irobalieva RN, Kowal J, Ni D, Nosol K, Bang-Sorensen R, Lancien L, Stahlberg H, Stieger B, Locher KP

EMDB-17655:
Human OATP1B3
Method: single particle / : Ciuta AD, Nosol K, Kowal J, Mukherjee S, Ramirez AS, Stieger B, Kossiakoff AA, Locher KP

EMDB-17677:
Human OATP1B1
Method: single particle / : Ciuta AD, Nosol K, Kowal J, Mukherjee S, Ramirez AS, Stieger B, Kossiakoff AA, Locher KP

PDB-8pg0:
Human OATP1B3
Method: single particle / : Ciuta AD, Nosol K, Kowal J, Mukherjee S, Ramirez AS, Stieger B, Kossiakoff AA, Locher KP

PDB-8phw:
Human OATP1B1
Method: single particle / : Ciuta AD, Nosol K, Kowal J, Mukherjee S, Ramirez AS, Stieger B, Kossiakoff AA, Locher KP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more