[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 794 items for (author: ke & sy)

EMDB-49451:
Cryo-EM structure of the PI3K alpha/KRas complex on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49456:
Cryo-EM structure of the Class 2 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni3:
Cryo-EM structure of the PI3K alpha/KRas complex on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni8:
Cryo-EM structure of the Class 2 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-47893:
Cryo-EM map of 2 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-47895:
Cryo-EM map of 4 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-70607:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

PDB-9om5:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-47885:
Cryo-EM local map of dimerized VRC36 Fabs
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-70888:
Structure of Geobacillus stearothermophilus RNase P ribozyme
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70891:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70892:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70893:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 3
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70896:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70897:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 10 mM Mg2+
Method: single particle / : Lee YT, Skeparnias I, Stagno JR, Wang YX

EMDB-70933:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70935:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70936:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70994:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70995:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70996:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 3)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-49455:
Cryo-EM structure of the Class 3 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49460:
Cryo-EM structure of the PI3K alpha/KRas complex on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni7:
Cryo-EM structure of the Class 3 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9nif:
Cryo-EM structure of the PI3K alpha/KRas complex on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-53004:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

PDB-9qc6:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

EMDB-49452:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49453:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49454:
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49458:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49459:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-49519:
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs low-pass filtered to 10 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni4:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni5:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9ni6:
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9nid:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9nie:
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

PDB-9nlc:
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs low-pass filtered to 10 angstroms
Method: single particle / : Torosyan H, Natalia J, Verba KA

EMDB-70937:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (Consensus)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70940:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with loop-back 5' leader
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-72527:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 97_F7 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72528:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 88_B4 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72529:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 3_H2 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72530:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 49_C09 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72531:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 33_C08 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72532:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 33_C02 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72533:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 18_D11 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72534:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 97_F7 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72535:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 88_B4 IgG
Method: single particle / : Jo G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more