[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 444 items for (author: jin & sl)

EMDB-49740:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2B3
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

EMDB-49741:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2C3
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

EMDB-49742:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V3A8f
Method: single particle / : Pletnev S, Kwong PD, Zhou T, Kwong P

PDB-9nrx:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2B3
Method: single particle / : Pletnev S, Kwong PD, Zhou T

PDB-9nry:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V2C3
Method: single particle / : Pletnev S, Kwong PD, Zhou T

PDB-9nrz:
Venezuelan Equine Encephalitis Virus in complex with the single domain antibody V3A8f
Method: single particle / : Pletnev S, Kwong PD, Zhou T

EMDB-48111:
Human M5 muscarinic acetylcholine receptor complex with mini-Gq and iperoxo
Method: single particle / : Burger WAC, Mobbs JI, Thal DM

PDB-9ek0:
Human M5 muscarinic acetylcholine receptor complex with mini-Gq and iperoxo
Method: single particle / : Burger WAC, Mobbs JI, Thal DM

EMDB-49659:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-49901:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

PDB-9nqj:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

PDB-9nxc:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-48110:
Human M5 muscarinic acetylcholine receptor complex with mini-Gq, agonist acetylcholine and positive allosteric modulator VU6007678
Method: single particle / : Burger WAC, Mobbs JI, Thal DM

PDB-9ejz:
Human M5 muscarinic acetylcholine receptor complex with mini-Gq, agonist acetylcholine and positive allosteric modulator VU6007678
Method: single particle / : Burger WAC, Mobbs JI, Thal DM

EMDB-47130:
cryoEM map of avb8/mutant-L-TGF-b1/GARP/28G11
Method: single particle / : Jin M, Cheng Y, Nishimura SL

EMDB-48650:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

PDB-9mv0:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

EMDB-62143:
SARS-CoV-2 related bat coronavirus BANAL-52 spike in the locked state
Method: single particle / : Li QQ, Cai X, Li XN, Zhang YB, Li R, Kang ZR, Wan DD, Wang JX, Yang JX, Shi JX, Jin SL, Peng Y, Zang N, Xie ZK, Wan YS, Shang J

EMDB-63398:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63399:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (consensus map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63400:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (focused map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63401:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (composite map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lum:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lun:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (consensus map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9luo:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (focused map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lup:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (composite map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-44435:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

PDB-9bcr:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-46892:
Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154
Method: single particle / : Yu X, Saphire EO

EMDB-46757:
Cryo-electron tomography of amorphous alpha-synuclein aggregates with embedded membranes and a lipid droplet
Method: electron tomography / : Jaber N, Dai W

EMDB-46764:
Mitochondrial membrane with external amorphous alpha-synuclein aggregate
Method: electron tomography / : Jaber N, Dai W

EMDB-45253:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c6o:
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46691:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9dak:
Merbecovirus PnNL2018B Spike glycoprotein RBD bound to the P. Nathusii ACE2
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-60483:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

PDB-8zuf:
Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD
Method: single particle / : Tang J, Deng Z

EMDB-42917:
De novo designed KWOCA 18 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42919:
De novo designed KWOCA 18 nanoparticle - Assembly in D5 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42921:
De novo designed KWOCA 70 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42924:
De novo designed KWOCA 70 nanoparticle - Assembly in D3 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42902:
Cryo-EM structure of human type I OSM receptor complex: model for full extracellular assembly
Method: single particle / : Zhou Y, Franklin MC

EMDB-42903:
Cryo-EM structure of human type I OSM receptor complex: model for assembly core region
Method: single particle / : Zhou Y, Franklin MC

EMDB-42904:
Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly
Method: single particle / : Zhou Y, Franklin MC

EMDB-42905:
Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region
Method: single particle / : Zhou Y, Franklin MC

PDB-8v29:
Cryo-EM structure of human type I OSM receptor complex: model for full extracellular assembly
Method: single particle / : Zhou Y, Franklin MC

PDB-8v2a:
Cryo-EM structure of human type I OSM receptor complex: model for assembly core region
Method: single particle / : Zhou Y, Franklin MC

PDB-8v2b:
Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly
Method: single particle / : Zhou Y, Franklin MC

PDB-8v2c:
Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region
Method: single particle / : Zhou Y, Franklin MC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more