[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,955 items for (author: jiang & m)

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-64741:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2v:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-76511:
CryoEM structure of the 41-kDa Thermus thermophilus HSP70 nucleotide-binding domain at 3.79 Angstrom resolution reveals the bound AMP-PNP and large-scale domain rearrangement
Method: single particle / : Tang L, Jiang Y, Kalodimos CG

EMDB-54346:
high-affinity choline transporter in DDM with Na+ and choline
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

EMDB-54347:
high-affinity choline transporter in DDM with Na+
Method: single particle / : Vilchez-Garcia J, Lopez-Alonso JP, Jiang H, Ubarretxena-Belandia I, Tascon I

EMDB-68024:
Full-length Clr4 Binding to H3K14 Ubiquitinated Nucleosome
Method: single particle / : Du YX, Ai HS

EMDB-68075:
Clr4(delKMT) Binding to H3K14 Ubiquitinated Nucleosome
Method: single particle / : Du YX, Ai HS

EMDB-48774:
Cryo-EM structure of GCGR-Gs complex with peptide 15
Method: single particle / : Zhang X, Jiang Y, Belousoff MJ, Wootten D, Sexton PM

PDB-9n04:
Cryo-EM structure of GCGR-Gs complex with peptide 15
Method: single particle / : Zhang X, Jiang Y, Belousoff MJ, Wootten D, Sexton PM

EMDB-48756:
Cryo-EM structure of GCGR-Gs complex with glucagon
Method: single particle / : Zhang X, Belousoff MJ, Wootten D, Sexton PM, Jiang Y

PDB-9mzg:
Cryo-EM structure of GCGR-Gs complex with glucagon
Method: single particle / : Zhang X, Belousoff MJ, Wootten D, Sexton PM, Jiang Y

EMDB-48782:
Cryo-EM structure of GCGR-Gs complex with oxyntomodulin
Method: single particle / : Zhang X, Jiang Y, Belousoff MJ, Wootten D, Sexton PM

PDB-9n0e:
Cryo-EM structure of GCGR-Gs complex with oxyntomodulin
Method: single particle / : Zhang X, Jiang Y, Belousoff MJ, Wootten D, Sexton PM

EMDB-63955:
Structure of ASC-PYD filament from condensates
Method: single particle / : Gao P, Li QJ, Li ZL

PDB-9u8k:
Structure of ASC-PYD filament from condensates
Method: single particle / : Gao P, Li QJ, Li ZL

EMDB-64853:
membrane protein S6A8 with RGX
Method: single particle / : Zhang SS

EMDB-64854:
membrane protein S6A8 with Crea
Method: single particle / : Zhang SS

EMDB-64855:
membrane protein S6A8 apo
Method: single particle / : Zhang SS

PDB-9v8w:
membrane protein S6A8 with RGX
Method: single particle / : Zhang SS

PDB-9v8x:
membrane protein S6A8 with Crea
Method: single particle / : Zhang SS

PDB-9v8y:
membrane protein S6A8 apo
Method: single particle / : Zhang SS

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-72977:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

PDB-9yi4:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

EMDB-67448:
Cryo-EM structure of the E. coli ArnA hexamer
Method: single particle / : Jiang X, Kikkawa M, Yanagisawa H

PDB-21ak:
Cryo-EM structure of the E. coli ArnA hexamer
Method: single particle / : Jiang X, Kikkawa M

EMDB-62051:
Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Method: single particle / : Zhao R, Du T, Ren Z, Gu J, Ru H

EMDB-62052:
Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Method: single particle / : Zhao R, Du T, Ren Z, Gu J, Ru H

PDB-9k4a:
Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Method: single particle / : Zhao R, Du T, Ren Z, Gu J, Ru H

PDB-9k4b:
Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Method: single particle / : Zhao R, Du T, Ren Z, Gu J, Ru H

EMDB-64335:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64363:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64365:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64367:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

PDB-9unw:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-70224:
amyloid fibril of recombinant full-length 2N4R tau complexed with unfractionated mouse liver RNA and seeded by Alzheimer's disease tau fibrils
Method: helical / : Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR, Eisenberg DS

EMDB-70227:
amyloid fibril of recombinant full-length 2N4R tau complexed with mouse liver 18S ribosomal RNA
Method: helical / : Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR, Eisenberg DS

PDB-9o8e:
amyloid fibril of recombinant full-length 2N4R tau complexed with unfractionated mouse liver RNA and seeded by Alzheimer's disease tau fibrils
Method: helical / : Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR, Eisenberg DS

PDB-9o8h:
amyloid fibril of recombinant full-length 2N4R tau complexed with mouse liver 18S ribosomal RNA
Method: helical / : Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR, Eisenberg DS

EMDB-63227:
Structure of human NLRP14-UHRF1 complex
Method: single particle / : Qi Q, Chi P, Liu S, Lu Y, Li J, Wang X, Jiang Y, Deng D

EMDB-66203:
Structure of dimeric mouse NLRP14-KDM2A-SKP1 complex
Method: single particle / : Liu S, Jiao H, Yan L, Qi Q, Chi P, Lu Y, Li JH, Li JL, Ju S, Wang X, Hu H, Deng D

EMDB-66204:
Structure of mouse NLRP14-KDM2A-SKP1 complex
Method: single particle / : Liu S, Jiao H, Yan L, Qi Q, Chi P, Lu Y, Li JH, Li JL, Ju S, Wang X, Hu H, Deng D

EMDB-66415:
Structure of dimeric mouse NLRP14-KDM2A-SKP1 complex /Focused Map A
Method: single particle / : Liu S, Jiao H, Yan L, Qi Q, Chi P, Lu Y, Li JH, Li JL, Ju S, Wang X, Hu H, Deng D

EMDB-66416:
Structure of dimeric mouse NLRP14-KDM2A-SKP1 complex /Focused Map B
Method: single particle / : Liu S, Jiao H, Yan L, Qi Q, Chi P, Lu Y, Li JH, Li JL, Ju S, Wang X, Hu H, Deng D

EMDB-66418:
Structure of dimeric mouse NLRP14-KDM2A-SKP1 complex /Consensus Map
Method: single particle / : Liu S, Jiao H, Yan L, Qi Q, Chi P, Lu Y, Li JH, Li JL, Ju S, Wang X, Hu H, Deng D

PDB-9ln6:
Structure of human NLRP14-UHRF1 complex
Method: single particle / : Qi Q, Chi P, Liu S, Lu Y, Li J, Li J, Wang X, Jiang Y, Deng D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more