[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,647 items for (author: jia & m)

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-65508:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65510:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0m:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0o:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65765:
Structure of BPDBA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

EMDB-65766:
Structure of ATPCA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

EMDB-65767:
Structure of betaine-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

EMDB-65768:
Structure of GABA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

EMDB-65769:
Structure of the apo state of human betaine/GABA transporter 1 in the inward-facing conformation
Method: single particle / : Wu JX, Zhou J

EMDB-65770:
Structure of the apo state of human betaine/GABA transporter 1 in the occluded conformation
Method: single particle / : Wu JX, Zhou J

PDB-9w97:
Structure of BPDBA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

PDB-9w98:
Structure of ATPCA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

PDB-9w99:
Structure of betaine-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

PDB-9w9a:
Structure of GABA-bound state of the human betaine/GABA transporter 1
Method: single particle / : Wu JX, Zhou J

PDB-9w9b:
Structure of the apo state of human betaine/GABA transporter 1 in the inward-facing conformation
Method: single particle / : Wu JX, Zhou J

PDB-9w9c:
Structure of the apo state of human betaine/GABA transporter 1 in the occluded conformation
Method: single particle / : Wu JX, Zhou J

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-64679:
Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Method: single particle / : Liu Q, Gui M, Wu JP, Zhou LN

PDB-9v10:
Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Method: single particle / : Liu Q, Gui M, Wu JP, Zhou LN

EMDB-70605:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

EMDB-70685:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
Method: subtomogram averaging / : DiMaio F, Chmielewski D, Weidle C

PDB-9om3:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

PDB-9op9:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
Method: subtomogram averaging / : DiMaio F, Chmielewski D, Weidle C

EMDB-55652:
Composite map of LRRC58- EloB/C-CDO1 in complex with neddylated CUL2-RBX1-ARIH1-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55653:
Consensus map of LRRC58- EloB/C-CDO1 in complex with neddylated CUL2-RBX1-ARIH1-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55654:
Focused map of LRRC58-CDO1 region from LRRC58- EloB/C-CDO1 in complex with neddylated CUL2-RBX1-ARIH1-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55655:
Focused map of CUL2-LRRC58-EloC interface region from LRRC58- EloB/C-CDO1 in complex with neddylated CUL2-RBX1-ARIH1-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55656:
Focused map of ARIH1-Ub region from LRRC58- EloB/C-CDO1 in complex with neddylated CUL2-RBX1-ARIH1-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55658:
Structure of LRRC58-EloB/C-CDO1 in complex with NEDD8-CUL5-RBX2-ARIH2-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55659:
Consensus Map of LRRC58-ELOB/C-CDO1 in complex with NEDD8-CUL5-RBX2-ARIH2-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-55660:
Focused map of LRRC58-CDO1 region from LRRC58-ELOB/C-CDO1-CUL5-RBX2-NEDD8-ARIH2-UB
Method: single particle / : Stier L, Andree GA, Schulman BA

PDB-9t7v:
Structure of LRRC58-EloB/C-CDO1 in complex with NEDD8-CUL5-RBX2-ARIH2-Ub
Method: single particle / : Stier L, Andree GA, Schulman BA

EMDB-69005:
Cannabinoid Receptor 1-Gi Complex
Method: single particle / : Liao Y, Zhang Y

EMDB-69006:
Cannabinoid Receptor 1-Gi Complex
Method: single particle / : Liao Y, Zhang Y

PDB-23iv:
Cannabinoid Receptor 1-Gi Complex
Method: single particle / : Liao Y, Zhang Y

PDB-23iw:
Cannabinoid Receptor 1-Gi Complex
Method: single particle / : Liao Y, Zhang Y

EMDB-66516:
AR234958 bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

EMDB-66517:
AR234958 bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x40:
AR234958 bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x41:
AR234958 bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

EMDB-62782:
Cryo-electron microscopic structure of a novel amidohydrolase ADH3 triple mutation
Method: single particle / : Dai LH, He BY, Hu YM, Xu YH, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

PDB-9l36:
Cryo-electron microscopic structure of a novel amidohydrolase ADH3 triple mutation
Method: single particle / : Dai LH, He BY, Hu YM, Xu YH, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

EMDB-65528:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65529:
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65530:
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65531:
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65532:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Method: single particle / : Li ZX, Kong JP, Wu WQ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more