[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 124 items for (author: hughes & sa)

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-18948:
Zorya anti-bacteriophage defense system ZorC WT
Method: single particle / : Hu H, Taylor NMI

PDB-8r68:
Zorya anti-bacteriophage defense system ZorC WT
Method: single particle / : Hu H, Taylor NMI

EMDB-18747:
Zorya anti-bacteriophage defense system ZorD apo form
Method: single particle / : Hu H, Taylor NMI

EMDB-18750:
Zorya anti-bacteriophage defense system ZorD in complex with ATP-gamma-S
Method: single particle / : Hu H, Taylor NMI

EMDB-18751:
Zorya anti-bacteriophage defense system ZorAB
Method: single particle / : Hu H, Taylor NMI

EMDB-18752:
EcZorAB_WT ZorB PGBDs Local refinement
Method: single particle / : Haidai H, Nicholas MIT

EMDB-18754:
Zorya anti-bacteriophage defense system ZorAB ZorA E86A_E89A, Calcium binding site mutation
Method: single particle / : Hu H, Taylor NMI

EMDB-18756:
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_359-592, ZorA tail middle deletion.
Method: single particle / : Hu H, Taylor NMI

EMDB-18766:
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_435-729, ZorA tail tip deletion.
Method: single particle / : Hu H, Taylor NMI

PDB-8qy7:
Zorya anti-bacteriophage defense system ZorD apo form
Method: single particle / : Hu H, Taylor NMI

PDB-8qyc:
Zorya anti-bacteriophage defense system ZorD in complex with ATP-gamma-S
Method: single particle / : Hu H, Taylor NMI

PDB-8qyd:
Zorya anti-bacteriophage defense system ZorAB
Method: single particle / : Hu H, Taylor NMI

PDB-8qyh:
Zorya anti-bacteriophage defense system ZorAB ZorA E86A_E89A, Calcium binding site mutation
Method: single particle / : Hu H, Taylor NMI

PDB-8qyk:
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_359-592, ZorA tail middle deletion.
Method: single particle / : Hu H, Taylor NMI

PDB-8qyy:
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_435-729, ZorA tail tip deletion.
Method: single particle / : Hu H, Taylor NMI

EMDB-42139:
Cryo-EM structure of the flagellar MotAB stator bound to FliG
Method: single particle / : Deme JC, Johnson S, Lea SM

EMDB-42376:
Cryo-EM structure of a single subunit of a Counterclockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

EMDB-42387:
Cryo-EM structure of a single subunit of a Clockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

EMDB-42439:
Cryo-EM structure of a Counterclockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

EMDB-42451:
Cryo-EM structure of a Clockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8ucs:
Cryo-EM structure of the flagellar MotAB stator bound to FliG
Method: single particle / : Deme JC, Johnson S, Lea SM

PDB-8umd:
Cryo-EM structure of a single subunit of a Counterclockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8umx:
Cryo-EM structure of a single subunit of a Clockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8uox:
Cryo-EM structure of a Counterclockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

PDB-8upl:
Cryo-EM structure of a Clockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
Method: single particle / : Johnson S, Deme JC, Lea SM

EMDB-28014:
HnRNPA2 D290V LCD PM3
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

PDB-8ec7:
HnRNPA2 D290V LCD PM3
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

EMDB-27713:
HnRNPA2 D290V LCD PM1
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

EMDB-27728:
HnRNPA2 D290V LCD PM2
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

PDB-8du2:
HnRNPA2 D290V LCD PM1
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

PDB-8duw:
HnRNPA2 D290V LCD PM2
Method: helical / : Eisenberg DS, Lu J, Ge P, Boyer DR

EMDB-26191:
Cryo-EM structure of human SARM1 TIR domain in complex with 1AD
Method: single particle / : Saikot FK, Kobe B, Ve T, Nanson JD, Gu W, Luo Z, Brillault L, Landsberg MJ

EMDB-24272:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
Method: single particle / : Kerry PS, Nanson JD

EMDB-24273:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
Method: single particle / : Kerry PS, Nanson JD

EMDB-24274:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (SAM-TIR:1AD)
Method: single particle / : Kerry PS, Adams S, Cunnea K, Brearley A, Bosanac T, Hughes RO, Ve T

PDB-7nak:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
Method: single particle / : Kerry PS, Nanson JD, Adams S, Cunnea K, Bosanac T, Kobe B, Hughes RO, Ve T

PDB-7nal:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
Method: single particle / : Kerry PS, Nanson JD, Adams S, Cunnea K, Bosanac T, Kobe B, Hughes RO, Ve T

EMDB-13075:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Method: single particle / : Barski MS, Ballandras-Colas A

EMDB-13076:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Method: single particle / : Barski MS, Ballandras-Colas A

EMDB-13077:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
Method: single particle / : Barski MS, Ballandras-Colas A

PDB-7ouf:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

PDB-7oug:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

PDB-7ouh:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

EMDB-23061:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

EMDB-23062:
Cryo-EM structure of EfPiwiA(MID/PIWI domains)-piRNA-long-target complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

EMDB-23063:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex
Method: single particle / : Chowdhury S, Anzelon TA, MacRae IJ, Lander GC

PDB-7kx7:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA complex
Method: single particle / : Anzelon TA, Chowdhury S, Lander GC, MacRae IJ

PDB-7kx9:
Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex
Method: single particle / : Anzelon TA, Chowdhury S, Lander GC, MacRae IJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more