[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 110 items for (author: huda & n)

EMDB-70557:
Cardiac lambda-6 light chain amyloid AL-224L single protofilament
Method: helical / : Hicks CW, Gursky O, Huda N

PDB-9oka:
Cardiac lambda-6 light chain amyloid AL-224L single protofilament
Method: helical / : Hicks CW, Gursky O, Huda N

EMDB-44474:
HIV-1 Env 16055 dGly4 NFL
Method: single particle / : Ozorowski G, Lee WH, Ward AB

PDB-9be9:
HIV-1 Env 16055 dGly4 NFL
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-52635:
50S subunit of P. gingivalis ribosome with Lefamulin
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52640:
70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52641:
Porphyromonas gingivalis 70S ribosome (W83 Strain)
Method: single particle / : Hiregange DG, Bashan A, Yonath A

PDB-9i5t:
50S subunit of P. gingivalis ribosome with Lefamulin
Method: single particle / : Hiregange DG, Bashan A, Yonath A

PDB-9i5v:
70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

PDB-9i5x:
Porphyromonas gingivalis 70S ribosome (W83 Strain)
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52767:
Focus refined 50S map of 70S P. gingivalis ribosome W83 strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52768:
Focus refined 30S body map of 70S P. gingivalis ribosome W83 strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52770:
Focus refined 30S head map of 70S P. gingivalis ribosome W83 strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52642:
Consensus map of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-52647:
Focused refinement of the large ribosomal subunit of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-52648:
Postprocessed map of the focused refinement of the small ribosomal subunit body of a MLSb sensitive S. aureus strain "KES34"
Method: single particle / : Rivalta A, Yonath A

EMDB-52649:
Postprocessed map of the focused refinement of the small ribosomal subunit head of the MLSb sensitive S. aureus strain "KES34"
Method: single particle / : Rivalta A, Yonath A

EMDB-53066:
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-53067:
Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

PDB-9qeg:
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

PDB-9qeh:
Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-47571:
Fully human monoclonal antibody targeting the cysteine-rich substrate-interacting region of ADAM17 on cancer cells.
Method: single particle / : Saha N, De La Cruz MJ, Goldgur Y, Nikolov DB

PDB-9e6k:
Fully human monoclonal antibody targeting the cysteine-rich substrate-interacting region of ADAM17 on cancer cells.
Method: single particle / : Saha N, De La Cruz MJ, Goldgur Y, Nikolov DB

EMDB-44410:
CryoEM structure of Apo-DIM2
Method: single particle / : Song J, Shao Z

EMDB-44411:
CryoEM structure of DIM2-HP1-H3K9me3-DNA complex
Method: single particle / : Song J, Shao Z

EMDB-44415:
CryoEM structure of DIM2-HP1 complex
Method: single particle / : Song J, Shao Z

PDB-9bap:
CryoEM structure of Apo-DIM2
Method: single particle / : Song J, Shao Z

PDB-9baq:
CryoEM structure of DIM2-HP1-H3K9me3-DNA complex
Method: single particle / : Song J, Shao Z

PDB-9baz:
CryoEM structure of DIM2-HP1 complex
Method: single particle / : Song J, Shao Z

EMDB-18990:
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)
Method: helical / : Wilkinson MW, Gilbert MAG, Fatima N, Jenkins J, O'Sullivan TJ, Schertel A, Halfon Y, Morrema THJ, Geibel M, Ranson NA, Radford SE, Hoozemans JJM, Frank RAW

EMDB-50148:
Tau PHF subtomogram average relating to CS1 extended data Figure 9A
Method: subtomogram averaging / : Jenkins J

EMDB-50152:
Tau PHF subtomogram average relating to CS2 Figure 3i-j.
Method: subtomogram averaging / : Jenkins J

EMDB-50153:
Tau PHF subtomogram average relating to CS3 extended data Figure 9c
Method: subtomogram averaging / : Jenkins J

EMDB-50155:
Tau PHF subtomogram average relating to CS4 extended data Figure 9d
Method: subtomogram averaging / : Jenkins J

EMDB-50156:
Tau PHF subtomogram average relating to CS5 extended data Figure 9b
Method: subtomogram averaging / : Jenkins J

EMDB-50157:
Tau PHF subtomogram average relating to CS6 extended data Figure 9e
Method: subtomogram averaging / : Jenkins J

EMDB-50159:
Tau PHF subtomogram average relating to CS7 extended data Figure 9f
Method: subtomogram averaging / : Jenkins J

EMDB-50160:
Tau PHF subtomogram average relating to LOL1_PHF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50161:
Tau SF subtomogram average relating to LOL1_SF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50162:
Tau SF subtomogram average relating to LOL2_SF Figure 4i-j
Method: subtomogram averaging / : Jenkins J

EMDB-33347:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-7xog:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

EMDB-33346:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-7xoe:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

EMDB-28156:
Cryo-EM structure of human DNMT3B homo-tetramer (form I)
Method: single particle / : Lu JW, Song JK

EMDB-28157:
Cryo-EM structure of human DNMT3B homo-tetramer (form II)
Method: single particle / : Lu JW, Song JK

EMDB-28158:
Cryo-EM structure of human DNMT3B homo-trimer
Method: single particle / : Lu JW, Song JK

EMDB-28159:
Cryo-EM structure of human DNMT3B homo-hexamer
Method: single particle / : Lu JW, Song JK

PDB-8eih:
Cryo-EM structure of human DNMT3B homo-tetramer (form I)
Method: single particle / : Lu JW, Song JK

PDB-8eii:
Cryo-EM structure of human DNMT3B homo-tetramer (form II)
Method: single particle / : Lu JW, Song JK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more