[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,503 items for (author: huang & q)

EMDB-48508:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS12
Method: single particle / : Wu S, Lei D

EMDB-48509:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS5
Method: single particle / : Wu S, Lei D

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-62890:
The apo structure (State 1) of African Swine Fever Virus DNA polymerase
Method: single particle / : Hu Z, Yan R

EMDB-62891:
Cryo-EM structure of ASFV DNA polymerase in a DNA replication state
Method: single particle / : Hu Z, Yan R

PDB-9l8t:
The apo structure (State 1) of African Swine Fever Virus DNA polymerase
Method: single particle / : Hu Z, Yan R

PDB-9l8u:
Cryo-EM structure of ASFV DNA polymerase in a DNA replication state
Method: single particle / : Hu Z, Yan R

EMDB-45440:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

PDB-9cca:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-61420:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y, Xiao Y, Huang Y, Jin Y, Yuan Y, Tian J, Ma W, Zhang Y

EMDB-61426:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

PDB-9jel:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y

PDB-9jf3:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

EMDB-65680:
Cryo-EM map of ASFV DNA polymerase in apo state 2
Method: single particle / : Hu Z, Yan R

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-71579:
Subtomogram average of influenza hemagglutinin (A/Puerto Rico/8/1934)
Method: subtomogram averaging / : Huang QJ, Schiffer CA

EMDB-64501:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

EMDB-64502:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

PDB-9utu:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

PDB-9utw:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-62750:
Cryo-EM structure of the ICT01-BTN3A1/BTN3A2 complex, local refinement
Method: single particle / : Xin WZ, Huang BD, Zhou Q

PDB-9l1o:
Cryo-EM structure of the ICT01-BTN3A1/BTN3A2 complex, local refinement
Method: single particle / : Xin WZ, Huang BD, Zhou Q

EMDB-62751:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex, local refinement
Method: single particle / : Xin WZ, Huang BD, Zhou Q

PDB-9l1p:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex, local refinement
Method: single particle / : Xin WZ, Huang BD, Zhou Q

EMDB-62622:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex
Method: single particle / : Xin WZ, Huang BD, Zhou Q

PDB-9kwz:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex
Method: single particle / : Xin WZ, Huang BD, Zhou Q

EMDB-62752:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex (2 fabs)
Method: single particle / : Xin WZ, Huang BD, Zhou Q

PDB-9l1q:
Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex (2 fabs)
Method: single particle / : Xin WZ, Huang BD, Zhou Q

EMDB-71884:
10E8-GT10.2 immunogen in complex with mouse Fab W6-10 and rhesus macaque Fab W10-09
Method: single particle / : Huang J, Ward AB

EMDB-71885:
10E8-GT10.2 immunogen in complex with Rhesus macaque Fab W3-02 and mouse Fab W6-03
Method: single particle / : Huang J, Ward AB

EMDB-63104:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

EMDB-63106:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63107:
Cryo-EM map of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhq:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more