[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 97 items for (author: hofnagel & o)

EMDB-53093:
Cryo-EM structure of the undecorated actin filament in the ADP-Pi state.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53094:
Cryo-EM structure of the actin filament bound by a single Coronin-1B molecule.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53096:
Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53105:
Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Method: helical / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53106:
Cryo-EM structure of the fully cofilin-1-decorated actin filament (cofilactin)
Method: helical / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53107:
Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1 on separate actin strands
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53108:
Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1, strand boundary
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53110:
Cryo-EM structure of the cofilactin filament core at 2.3 Angstrom resolution.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53111:
Cryo-EM reconstruction of the Coronin-1B-decorated actin filament bound by two Cofilin-1 molecules (crosslinked)
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53112:
Cryo-EM reconstruction of the Coronin-1B-decorated actin filament bound by three Cofilin-1 molecules (crosslinked)
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53113:
Cryo-EM reconstruction of the Coronin-1B-decorated actin filament bound by four Cofilin-1 molecules (crosslinked)
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53114:
Cryo-EM structure of the Coronin-1B-decorated actin filament bound by one Cofilin-1 molecule (crosslinked)
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53118:
Cryo-EM reconstruction of the cofilactin filament core bound by AIP1
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53119:
Cryo-EM structure of the cofilactin filament pointed end
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53121:
Cryo-EM structure of the cofilactin barbed end bound by AIP1
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-53122:
Cryo-EM structure of the cofilactin barbed end bound by two AIP1 molecules
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qew:
Cryo-EM structure of the undecorated actin filament in the ADP-Pi state.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qey:
Cryo-EM structure of the actin filament bound by a single Coronin-1B molecule.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qf2:
Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfb:
Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Method: helical / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfd:
Cryo-EM structure of the fully cofilin-1-decorated actin filament (cofilactin)
Method: helical / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfe:
Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1 on separate actin strands
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfg:
Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1, strand boundary
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfj:
Cryo-EM structure of the cofilactin filament core at 2.3 Angstrom resolution.
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfk:
Cryo-EM structure of the Coronin-1B-decorated actin filament bound by one Cofilin-1 molecule (crosslinked)
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfo:
Cryo-EM structure of the cofilactin filament pointed end
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfq:
Cryo-EM structure of the cofilactin barbed end bound by AIP1
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

PDB-9qfw:
Cryo-EM structure of the cofilactin barbed end bound by two AIP1 molecules
Method: single particle / : Oosterheert W, Boiero Sanders M, Hofnagel O, Bieling P, Raunser S

EMDB-50506:
Cryo-EM structure of the phalloidin-bound pointed end of the actin filament.
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

EMDB-50507:
Structure of the undecorated pointed end of F-actin
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

EMDB-50516:
Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 1)
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

EMDB-50517:
Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 2).
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

PDB-9fjm:
Cryo-EM structure of the phalloidin-bound pointed end of the actin filament.
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

PDB-9fjo:
Structure of the undecorated pointed end of F-actin
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

PDB-9fju:
Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 1)
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

PDB-9fjy:
Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 2).
Method: single particle / : Boiero Sanders M, Oosterheert W, Hofnagel O, Bieling P, Raunser S

EMDB-17435:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion in complex with Arf3
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17436:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17437:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin, the central region of the toxin
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17438:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin, the tail region of the toxin
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17439:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin, the head of the toxin
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17440:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-17450:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin, the low-resolution consensus map
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

PDB-8p50:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion in complex with Arf3
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

PDB-8p51:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

PDB-8p52:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin
Method: single particle / : Belyy A, Heilen P, Hofnagel O, Raunser S

EMDB-16888:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the R183W mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

PDB-8oi8:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the R183W mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

EMDB-16887:
Cryo-EM structure of the undecorated barbed end of filamentous beta/gamma actin
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

EMDB-16889:
Cryo-EM structure of ADP-bound, filamentous beta-actin harboring the N111S mutation
Method: single particle / : Oosterheert W, Blanc FEC, Roy A, Belyy A, Hofnagel O, Hummer G, Bieling P, Raunser S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more