[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 251 items for (author: henry & x)

EMDB-73821:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

PDB-9z5q:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

EMDB-52853:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

PDB-9ign:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

EMDB-51664:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

PDB-9gxj:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

EMDB-48523:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9mqg:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44341:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44342:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8b:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8c:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-51365:
Cryo-EM structure of human SLC45A4 in lipid nanodiscs
Method: single particle / : Markusson S, Newstead S

EMDB-51377:
Cryo-EM structure of human SLC45A4 in detergent
Method: single particle / : Markusson S, Deme JC, Lea SM, Newstead S

PDB-9ghz:
Cryo-EM structure of human SLC45A4 in lipid nanodiscs
Method: single particle / : Markusson S, Newstead S

PDB-9giu:
Cryo-EM structure of human SLC45A4 in detergent
Method: single particle / : Markusson S, Deme JC, Lea SM, Newstead S

EMDB-61292:
Cryo-EM structure of MPXV core protease in complex with compound A1
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

EMDB-61293:
Cryo-EM structure of MPXV core protease in complex with compound A3
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

EMDB-61294:
Cryo-EM structure of MPXV protease in complex with compound A4
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

EMDB-61300:
Cryo-EM structure of MPXV core protease in the apo-form
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

EMDB-62516:
Cryo-EM structure of MPXV core protease in complex with aloxistatin(E64d)
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

EMDB-62520:
Cryo-EM structure of MPXV core protease in complex with the substrate derivative I-G18
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

PDB-9jal:
Cryo-EM structure of MPXV core protease in complex with compound A1
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

PDB-9jam:
Cryo-EM structure of MPXV core protease in complex with compound A3
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

PDB-9jan:
Cryo-EM structure of MPXV protease in complex with compound A4
Method: single particle / : Gao Y, Xie X, Lan W, Wang W, Yang H

PDB-9jaq:
Cryo-EM structure of MPXV core protease in the apo-form
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

PDB-9kqv:
Cryo-EM structure of MPXV core protease in complex with aloxistatin(E64d)
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

PDB-9kr6:
Cryo-EM structure of MPXV core protease in complex with the substrate derivative I-G18
Method: single particle / : Lan W, You T, Li D, Dong X, Wang H, Xu J, Wang W, Gao Y, Yang H

EMDB-47040:
Structure of rat beta-arrestin 1 by fiducial-assisted cryo-EM
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

EMDB-47042:
Structure of rat beta-arrestin 1 bound to allosteric inhibitor
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

PDB-9dng:
Structure of rat beta-arrestin 1 by fiducial-assisted cryo-EM
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

PDB-9dnm:
Structure of rat beta-arrestin 1 bound to allosteric inhibitor
Method: single particle / : Pakharukova N, Kahsai AW, Masoudi A, Lefkowitz RJ

EMDB-42794:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-42795:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 in C1
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-42796:
Magnesium transporter MgtA monomer from E. coli in 5 mM MgCl2
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-42797:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ATP
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-42798:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ATPyS
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-42799:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ADP
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uy7:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uy8:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 in C1
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uy9:
Magnesium transporter MgtA monomer from E. coli in 5 mM MgCl2
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uya:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ATP
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uyb:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ATPyS
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

PDB-8uyc:
Magnesium transporter MgtA dimer from E. coli in 5 mM MgCl2 and 5 mM ADP
Method: single particle / : Zeinert R, Zhou F, Cavalcanti Franco PH, Zoeller J, Lessen H, Iyer A, Langer JD, Sodt AJ, Storz G, Matthies D

EMDB-41459:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD, Xu J

EMDB-50815:
Rea1 delta AAA2H2alpha ATPgS structure
Method: single particle / : Busselez J, Schmidt H

EMDB-50816:
Rea1 D2915A-R2976A-D3042A mutant ATP conformation I
Method: single particle / : Busselez J, Schmidt H

EMDB-50817:
Rea1 D2915A-R2976A-D3042A ATP conformation II
Method: single particle / : Busselez J, Schmidt H

EMDB-50818:
Rea1 D2915A-R2976A-D3042A mutant ATP conformation III
Method: single particle / : Busselez J, Schmidt H

EMDB-36782:
SID1 transmembrane family member 2
Method: single particle / : Guo H, Qi C, Lu Y, Yang H, Zhu Y, Sun F, Ji X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more