[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 536 items for (author: he & zz)

EMDB-50580:
SOLIST cryo-tomogram of native left ventricle mouse heart muscle #1

EMDB-50582:
SOLIST native mouse heart muscle tomogram #2

EMDB-40812:
Structure of SARS-CoV-2 (HP-GSAS-Mut7) spike in complex with TXG-0078 Fab -Conformation 1

EMDB-40813:
Structure of SARS-CoV-2 (HP-GSAS-Mut7) spike in complex with TXG-0078 Fab -Conformation 2

EMDB-40261:
DDB1/CRBN in complex with ARV-471 and the ER ligand-binding domain

EMDB-40814:
Local refinement of SARS-CoV-2 (HP-GSAS-Mut7) spike NTD in complex with TXG-0078 Fab

PDB-8swh:
Local refinement of SARS-CoV-2 (HP-GSAS-Mut7) spike NTD in complex with TXG-0078 Fab

EMDB-41409:
Cryo-EM structure of PCSK9 mimic HIT01-K21Q-R218E with AMG145 Fab

EMDB-43753:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain

PDB-8w2o:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain

EMDB-18639:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)

EMDB-18649:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab

EMDB-19002:
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein

PDB-8qsq:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)

PDB-8qtd:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab

PDB-8r8k:
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein

EMDB-40180:
MsbA bound to cerastecin C

PDB-8gk7:
MsbA bound to cerastecin C

EMDB-18381:
UFL1 E3 ligase bound 60S ribosome

EMDB-18382:
UFL1 E3 ligase bound 60S ribosome

PDB-8qfc:
UFL1 E3 ligase bound 60S ribosome

PDB-8qfd:
UFL1 E3 ligase bound 60S ribosome

EMDB-19431:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)

EMDB-19433:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid

PDB-8rq3:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)

PDB-8rq4:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid

EMDB-18991:
Sub-tomogram average of the C. elegans ATP synthase dimer

EMDB-43033:
Structure of 80alpha portal protein expressed in E. coli

EMDB-43142:
SaPI1 mature capsid structure containing DNA

EMDB-43143:
SaPI1 mature capsid structure without DNA

EMDB-43145:
SaPI1 portal structure in mature capsids containing DNA

EMDB-43146:
SaPI1 portal structure in mature capsids without DNA

EMDB-43147:
SaPI1 portal-capsid interface in mature capsids with DNA

PDB-8v8b:
Structure of 80alpha portal protein expressed in E. coli

PDB-8vd4:
SaPI1 mature capsid structure containing DNA

PDB-8vd5:
SaPI1 mature capsid structure without DNA

PDB-8vd8:
SaPI1 portal structure in mature capsids containing DNA

PDB-8vdc:
SaPI1 portal structure in mature capsids without DNA

PDB-8vde:
SaPI1 portal-capsid interface in mature capsids with DNA

EMDB-37503:
Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome

EMDB-17187:
48-nm repeat of the native axonemal doublet microtubule from bovine sperm

PDB-8otz:
48-nm repeat of the native axonemal doublet microtubule from bovine sperm

EMDB-16458:
Electron cryo-tomography and subtomogram averaging of cytoplasmic lattice filaments from mammalian oocytes

EMDB-16472:
In situ cryo-electron tomogram of cytoplasmic lattice filaments from a mouse oocyte

EMDB-16859:
Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1)

EMDB-16869:
Low-resolution structure of BRCA1dExon11-FL BARD1 (closed state)

EMDB-16870:
Low-resolution structure of BRCA1dExon11-FL BARD1 (open state)

EMDB-17928:
Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map 2)

PDB-8off:
Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1)

EMDB-41153:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more