[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 108 items for (author: gu & zw)

EMDB-64784:
Structure of TolC and YbjP closed state complex
Method: single particle / : Ge XF, Gu ZW, Wang JW

EMDB-64785:
Structure of TolC, YbjP, and AcrABZ complex
Method: single particle / : Ge XF, Gu ZW, Wang JW

EMDB-64787:
Structure of TolC, YbjP, and AcrA complex
Method: single particle / : Ge XF, Gu ZW, Wang JW

EMDB-62490:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62491:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in UQ1-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-62495:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in pydiflumetofen-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-63115:
Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in Y19315-bound state
Method: single particle / : Li ZW, Ye Y, Yang GF

EMDB-52226:
Structure of Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

EMDB-52227:
Structure of 2x Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

PDB-9hjt:
Structure of Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

PDB-9hju:
Structure of 2x Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Method: single particle / : Borza R, Perrakis A

EMDB-50111:
Cryo-EM structure of the I923V MDA5-dsRNA filament without nucleotide
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50136:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 81-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50137:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 88-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50150:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 73-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50165:
Cryo-EM structure of the I923V MDA5-dsRNA filament in complex with ATP
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50175:
Cryo-EM structure of the A946T MDA5-dsRNA filament
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f0j:
Cryo-EM structure of the I923V MDA5-dsRNA filament without nucleotide
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f1u:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 81-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f20:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 88-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f2l:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 73-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f2w:
Cryo-EM structure of the I923V MDA5-dsRNA filament in complex with ATP
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f3p:
Cryo-EM structure of the A946T MDA5-dsRNA filament
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-61073:
Cap region of monocin
Method: single particle / : Wang JW, Gu ZW

EMDB-61074:
Tip region of monocin
Method: single particle / : Wang JW, Gu ZW

EMDB-61075:
Side fiber of monocin
Method: single particle / : Wang JW, Gu ZW

EMDB-61387:
Structure of chanoclavine synthase from Claviceps fusiformis
Method: single particle / : Liu ZW, Wang T, Li X, Shen PP, Huang JW, Chen CC, Guo RT

EMDB-61388:
Structure of chanoclavine synthase from Claviceps fusiformis in complex with prechanoclavine
Method: single particle / : Liu ZW, Wang T, Li X, Shen PP, Huang JW, Chen CC, Guo RT

EMDB-39291:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-39323:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60256:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60317:
Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Li ZW, Cui GR, Yang GF

EMDB-60320:
Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-60323:
Cryo-EM structure of YF23694-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-19938:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with water molecules at 1.94 A resolution
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-19939:
Cryo-EM structure of Spinacia oleracea cytochrome b6f with decylplastoquinone bound at plastoquionol reduction site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-19940:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with inhibitor DBMIB bound at plastoquinol oxidation site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es7:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with water molecules at 1.94 A resolution
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es8:
Cryo-EM structure of Spinacia oleracea cytochrome b6f with decylplastoquinone bound at plastoquionol reduction site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

PDB-9es9:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with inhibitor DBMIB bound at plastoquinol oxidation site
Method: single particle / : Pietras R, Pintscher S, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A

EMDB-42464:
chEnv TTT protein in complex with 43A2 Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-42468:
chEnv TTT protein in complex with CM01A Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-43664:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43665:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (cH125 TTT)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43666:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H2/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43668:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H5/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43669:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines. H5 GCN4
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-38540:
Prohead portal of bacteriophage lambda
Method: single particle / : Wang JW, Gu ZW

EMDB-38541:
Prohead portal vertex of bacteriophage lambda
Method: single particle / : Wang JW, Gu ZW

EMDB-38542:
Mature virion portal of bacteriophage lambda
Method: single particle / : Wang JW, Gu ZW

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more