[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 7,460 items for (author: du & s)

EMDB-70719:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

PDB-9opj:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-71850:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71851:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71852:
Mitochondria with amorphous calcium phosphate granules from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71853:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71859:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71860:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71861:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71862:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71863:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71864:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71733:
Focused map for TPR on CC1/4 and KLC-CC
Method: single particle / : ashaduzzaman M, Al-Bassam J

EMDB-71734:
Kinesin-1 heterotetramer
Method: single particle / : Ashaduzzaman M, Al-Bassam J

PDB-9pmb:
Kinesin-1 heterotetramer
Method: single particle / : Ashaduzzaman M, Al-Bassam J

EMDB-71730:
Focused map Coiled-coils 2 and 3
Method: single particle / : Ashaduzzaman M, Al-Bassam J

EMDB-71731:
focused map for Motor/Tails/CC0
Method: single particle / : Ashaduzzaman M, Al-Bassam J

EMDB-71732:
Focus map for motor/TPR/CC
Method: single particle / : Ashaduzzaman M, Al-Bassam J

EMDB-77343:
Cryo-EM global density map of BA.1-S/2130WT/2196-S93Y
Method: single particle / : Du J, Pallesen J

EMDB-77344:
Structure of BA.1-S-RBD/2130WT/2196-S93Y
Method: single particle / : Du J, Pallesen J

EMDB-77347:
Cryo-EM global density map of BA.4-S/Ab#10-M30W-S94M IgG
Method: single particle / : Du J, Pallesen J

EMDB-77348:
Structure of BA.4-S-RBD/Ab#10-M30W-S94M
Method: single particle / : Du J, Pallesen J

PDB-36az:
Structure of BA.1-S-RBD/2130WT/2196-S93Y
Method: single particle / : Du J, Pallesen J

PDB-36bb:
Structure of BA.4-S-RBD/Ab#10-M30W-S94M
Method: single particle / : Du J, Pallesen J

EMDB-77085:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77086:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77087:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77088:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77112:
Human Double-ring Hsp10
Method: single particle / : Page AA, Walti MA

EMDB-77126:
Human Single-ring Hsp10
Method: single particle / : Page AA, Walti MA

PDB-13kk:
Human Double-ring Hsp10
Method: single particle / : Page AA, Walti MA

PDB-13kw:
Human Single-ring Hsp10
Method: single particle / : Page AA, Walti MA

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-54627:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

EMDB-54956:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

PDB-9s6p:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

PDB-9sk3:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

EMDB-77092:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing by single particle analysis
Method: single particle / : Kopylov M, Ali M, Montabana EA, Paraan M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more