[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,979 items for (author: dan & t)

EMDB-56126:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq7:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-69219:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-69220:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sp:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sq:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-73618:
Cryo-EM structure of the core region of cIL-U1A-Fab1R-PGA1-sfFab quaternary complex at 2.9 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-73655:
The global map of cIL-U1A-Fab1R-PGA1-sfFab18 quaternary complex
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-73840:
Cryo-EM structure of the open state of cIL RNA region at 4.3 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-75812:
The composite map of cIL-U1A-Fab1R-PGA1-sfFab18 quaternary complex
Method: single particle / : Filippova EV, Kossiakoff AA

PDB-9yxv:
Cryo-EM structure of the core region of cIL-U1A-Fab1R-PGA1-sfFab quaternary complex at 2.9 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

PDB-9z6i:
Cryo-EM structure of the open state of cIL RNA at 4.3 A resolution
Method: single particle / : Filippova EV, Kossiakoff AA

EMDB-54381:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

EMDB-54382:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

EMDB-54383:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54385:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54386:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54387:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54388:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54389:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54392:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54393:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54394:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54395:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryi:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

PDB-9ryj:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

PDB-9ryk:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9rym:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9ryn:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryo:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryp:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryq:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryu:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryv:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryw:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryx:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-55617:
Cryo-EM structure of the human LENG8-PCID2-DSS1 complex bound to UAP56 and RRP1B
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

EMDB-55619:
Cryo-EM structure of the human GANP-PCID2-DSS1 complex bound to UAP56
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

PDB-9t6l:
Cryo-EM structure of the human LENG8-PCID2-DSS1 complex bound to UAP56 and RRP1B
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

PDB-9t6n:
Cryo-EM structure of the human GANP-PCID2-DSS1 complex bound to UAP56
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

EMDB-54255:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54256:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54257:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54258:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtw:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtx:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rty:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtz:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-75027:
Adenovirus comprising hexons displaying BAP in the HVR5 region
Method: single particle / : Reddy VS, Ma OS

EMDB-75053:
Adenovirus hexon displaying BAP insertion in the HVR5 region
Method: single particle / : Reddy VS, Ma OX

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more