[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: chen & xz)

EMDB-63186:
Human RNA Polymerase III de novo transcribing complex 10 (TC10)

EMDB-38654:
State 8a (S8a) of yeast 80S ribosome bound to 3 tRNAs and eEF1A and eEF3 during mRNA decoding

EMDB-38655:
State 8 (S8) of yeast 80S ribosome bound to 3 tRNAs and eEF1A during mRNA decoding

EMDB-38656:
State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs and eEF1A during mRNA decoding

EMDB-38657:
State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding

EMDB-38658:
State 2a (S2a) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer

EMDB-38659:
State 2b (S2b) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer

EMDB-38660:
State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

EMDB-38661:
State 2d (S2d) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transfer

EMDB-38662:
State 2e (S2e) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer

EMDB-38663:
State 2f (S2f) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer

EMDB-38664:
State 3 (S3) of yeast 80S ribosome bound to 2 tRNAs during translocation

EMDB-38665:
State 4 (S4) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation

EMDB-38666:
State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation

EMDB-38667:
State 5 (S5) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation

EMDB-38668:
State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation

EMDB-38669:
State 7 (S7) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during tranlocation

EMDB-38670:
State 9 (S9) of yeast 80S ribosome bound to 2 tRNAs

EMDB-38671:
State 10 (S10) of yeast 80S ribosome bound to A tRNA

EMDB-38374:
Structure of acyltransferase GWT1 bound to palmitoyl-CoA

EMDB-38375:
Structure of acyltransferase GWT1 in complex with manogepix(APX001A)

EMDB-39299:
Human resource SGLT1-MAP17 complex

EMDB-36980:
Cryo-EM structure of DSR2-TTP

EMDB-36982:
Cryo-EM structure of DSR2-DSAD1 state 2

EMDB-37272:
Cryo-EM structure of DSR2-DSAD1 state 1

EMDB-37603:
Cryo-EM structure of DSR2-DSAD1

EMDB-38421:
Cryo-EM structure of tail tube protein

EMDB-36123:
Cryo-EM structure of the NmeCas9-sgRNA-AcrIIC4 ternary complex

EMDB-36343:
The cryo-EM structure of Parvovirus milled by 30 keV gallium FIB at 3.09 Angstrom resolution.

EMDB-36346:
The cryo-EM structure of 10-20nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 4.05 Angstrom resolution.

EMDB-36347:
The cryo-EM structure of 20-30nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 3.88 Angstrom resolution.

EMDB-36348:
The cryo-EM structure of 30-40 nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 3.82 Angstrom resolution.

EMDB-36349:
The cryo-EM structure of 40-50 nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 3.62 Angstrom resolution.

EMDB-36350:
The cryo-EM structure of 50-60 nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 3.60 Angstrom resolution.

EMDB-36351:
The cryo-EM structure of 60-70 nm group Parvovirus from lamellae surface milled by 30 keV Ga+ FIB at 3.57 Angstrom resolution.

EMDB-36352:
The cryo-EM structure of Parvovirus milled by 8 keV gallium FIB at 3.11 Angstrom resolution.

EMDB-36355:
The cryo-EM structure of 10-20 nm group Parvovirus from lamellae surface milled by 8 keV Ga+ FIB at 3.88 Angstrom resolution.

EMDB-36356:
The cryo-EM structure of 20-30 nm group Parvovirus from lamellae surface milled by 8 keV Ga+ FIB at 3.70 Angstrom resolution.

EMDB-36357:
The cryo-EM structure of 30-40 nm group Parvovirus from lamellae surface milled by 8 keV Ga+ FIB at 3.60 Angstrom resolution.

EMDB-36358:
The cryo-EM structure of 40-50 nm group Parvovirus from lamellae surface milled by 8 keV Ga+ FIB at 3.54 Angstrom resolution.

EMDB-36359:
The cryo-EM structure of 50-60 nm group Parvovirus from lamellae surface milled by 8 keV Ga+ FIB at 3.57 Angstrom resolution.

EMDB-36363:
The cryo-EM structure of ribosome from yeast lamellae milled by 8 keV Ga+ FIB at 3.78 Angstrom resolution.

EMDB-35240:
Cryo-EM structure of TIR-APAZ/Ago-gRNA-DNA complex

EMDB-35241:
Cryo-EM structure of TIR-APAZ/Ago-gRNA complex

EMDB-35592:
Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex

EMDB-25673:
Prepore structure of pore-forming toxin Epx1

EMDB-31482:
Cryo-EM structure of the human TACAN channel in a closed state

EMDB-30646:
Structure of Calcium-Sensing Receptor in an inactive state

EMDB-7786:
human PKD2 F604P mutant

EMDB-6907:
Atomic structure of the herpes simplex virus type 2 B-capsid

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more