[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,430 items for (author: bu & f)

EMDB-74628:
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111.
Method: single particle / : Nam YW, Ramanishka A, Zhang M

PDB-9zrr:
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111.
Method: single particle / : Nam YW, Ramanishka A, Zhang M

EMDB-70605:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

EMDB-55311:
Immature TBEV envelope spike with interaction partners underneath - SPA
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Nepovimova L

EMDB-55312:
Immature TBEV envelope spike with interaction partners underneath - STA
Method: subtomogram averaging / : Fuzikt T, Plevka P, Smerdova L, Nepovimova L

EMDB-55313:
Asymmetric reconstruction of immature TBEV particle with 2 missing pentamers
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Nepovimova L

EMDB-55314:
Asymmetric reconstruction of immature TBEV particle with 2 irregularities
Method: single particle / : Fuzikt T, Plevka P, Smerdova L, Nepovimova L

EMDB-55315:
Asymmetric reconstruction of immature TBEV particle with altered 5-fold
Method: single particle / : Fuzikt T, Plevka P, Smerdova L, Nepovimova L

EMDB-55316:
Asymmetric reconstruction of TBEV virion
Method: single particle / : Fuzikt T, Plevka P, Smerdova L, Nepovimova L

EMDB-70685:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied
Method: subtomogram averaging / : DiMaio F, Chmielewski D, Weidle C

EMDB-55389:
Human carboxyhemoglobin bound to full-length Staphylococcus aureus IsdH - IsdH:Hbdim complex
Method: single particle / : Buoli Comani V, De Bei O, Luisi BF, Bettati S

PDB-9szw:
Human carboxyhemoglobin bound to full-length Staphylococcus aureus IsdH - IsdH:Hbdim complex
Method: single particle / : Buoli Comani V, De Bei O, Luisi BF, Bettati S

EMDB-66013:
Cryo-EM Map of the Periplasmic Domain of AAA Protease FtsH in a Novel Orientation
Method: single particle / : Kabasakal BV, Goc G, Yadav S, Borucu U, Berger I, Schaffitzel C

EMDB-66014:
Cryo-EM Map of the Transmembrane Domain of AAA Protease FtsH in a Novel Orientation
Method: single particle / : Kabasakal BV, Goc G, Yadav S, Borucu U, Berger I, Schaffitzel C

EMDB-66015:
Cryo-EM Map of Transmembrane Domain of AAA+ protease FtsH
Method: single particle / : Kabasakal BV, Goc G, Yadav S, Borucu U, Berger I, Schaffitzel C

EMDB-66269:
Cryo-EM Structure of the Periplasmic Domain of AAA Protease FtsH
Method: single particle / : Kabasakal BV, Goc G, Yadav S, Borucu U, Berger I, Schaffitzel C

PDB-9wus:
Cryo-EM Structure of the Periplasmic Domain of AAA Protease FtsH
Method: single particle / : Kabasakal BV, Goc G, Yadav S, Borucu U, Berger I, Schaffitzel C

EMDB-53970:
pre-Initiation Complex on ARS1 DNA (monomer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

EMDB-53971:
Pre-Initiation Complex on ARS1 DNA (dimer)
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-53973:
Phospho-MCM double hexamer bound to Sld3-Sld7-Cdc45 on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-56897:
sCMGE assembled on ARS1 DNA with RPA and no Sld2
Method: single particle / : Puehringer T, Palm G, Costa A

EMDB-56898:
sCMGE assembled on ARS1 DNA with Sld2 and RPA
Method: single particle / : Palm G, Costa A

EMDB-73749:
Cryo-EM structure of KP.3 spike in complex with Nb9B
Method: single particle / : Ye G, Bu F, Liu B, Li F

EMDB-73750:
Structure of KP.3 spike in complex with Nanosota-9B (local refinement)
Method: single particle / : Ye G, Bu F, Liu B, Li F

PDB-9z1m:
Cryo-EM structure of KP.3 spike in complex with Nb9B
Method: single particle / : Ye G, Bu F, Liu B, Li F

PDB-9z1n:
Structure of KP.3 spike in complex with Nanosota-9B (local refinement)
Method: single particle / : Ye G, Bu F, Liu B, Li F

EMDB-55478:
Human carboxyhemoglobin bound to full-length Staphylococcus aureus IsdH - 1IsdH:2Hbdim complex
Method: single particle / : Buoli Comani V, De Bei O, Luisi BF, Bettati S

EMDB-56440:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56441:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56442:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 4.8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56443:
CryoEM map of dimeric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56444:
CryoEM map of tetrameric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-54222:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain (monomer)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54223:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54224:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) in autoinhibted conformation (monomer)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54227:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) (consensus refinement)
Method: single particle / : Tafir L, Zou L, Loewith R

EMDB-54228:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) (monomer focused)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54229:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) (Avo3 focused)
Method: single particle / : Tafur L, Zou L, Loewth R

EMDB-54230:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) (Bit61 focused)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54231:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with Avo1 PH (Lst8 monomer focused)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54232:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) in autoinhibited conformation (monomer Lst8 focused)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54233:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) (Lst8-Avo1 CRIM focused)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54234:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain (composite map)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-54235:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) in autoinhibited conformation (composite map)
Method: single particle / : Tafur L, Zou L, Loewith R

PDB-9rsq:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain (monomer)
Method: single particle / : Tafur L, Zou L, Loewith R

PDB-9rss:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain
Method: single particle / : Tafur L, Zou L, Loewith R

PDB-9rst:
Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) in autoinhibted conformation (monomer)
Method: single particle / : Tafur L, Zou L, Loewith R

EMDB-71307:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-71308:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9p6e:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more