Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Subunit specialisation in AAA+ proteins and substrate unfolding during transcription complex remodelling
Journal, issue, pages	To Be Published
Publish date	Feb 26, 2025 (structure data deposition date)
Authors	Gao F / Ye F / Buck M / Zhang X
External links	Search PubMed
Methods	EM (single particle)
Resolution	4.6 - 8.3 Å
Structure data	52914 9q91 EMDB-52914, PDB-9q91: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 6 Method: EM (single particle) / Resolution: 7.2 Å 52916 9q93 EMDB-52916, PDB-9q93: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 4 Method: EM (single particle) / Resolution: 6.6 Å 52917 9q94 EMDB-52917, PDB-9q94: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 3 Method: EM (single particle) / Resolution: 5.8 Å 52918 9q95 EMDB-52918, PDB-9q95: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -10 to -1 Method: EM (single particle) / Resolution: 6.8 Å 52919 9q96 EMDB-52919, PDB-9q96: Cryo-EM Structure of Bacterial RNA polymerase-sigma54 transcription open complex with wild type sigma54, from RPi(-10-1) Method: EM (single particle) / Resolution: 4.6 Å EMDB-52931: PspF(1-275)-DNA-sigma54(R1) focussed map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 6 Method: EM (single particle) / Resolution: 7.07 Å EMDB-52932: RNA polymerase-sigma54-DNA focussed map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 6 Method: EM (single particle) / Resolution: 6.8 Å EMDB-52933: Consensus map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 6 Method: EM (single particle) / Resolution: 7.2 Å EMDB-52937: PspF(1-275)-DNA-sigma54(R1) focussed map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 1 Method: EM (single particle) / Resolution: 7.6 Å 52947 9q97 EMDB-52947, PDB-9q97: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 2 Method: EM (single particle) / Resolution: 4.6 Å EMDB-52948: RNA polymerase-sigma54-DNA focussed map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 1 Method: EM (single particle) / Resolution: 6.8 Å EMDB-52949: Consensus map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 1 Method: EM (single particle) / Resolution: 6.8 Å 52950 9q98 EMDB-52950: Composite map of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 1 PDB-9q98: CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF containing nifH promoter DNA containing mismatch from -11 to -8 - conformation 1 Method: EM (single particle) / Resolution: 8.3 Å
Chemicals	ChemComp-ADP: ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying moleculeYM ChemComp-AF3: ALUMINUM FLUORIDE ChemComp-MG*: Unknown entry
Source	escherichia coli k-12 (bacteria) klebsiella pneumoniae (bacteria)
Keywords	TRANSCRIPTION / sigma factor / complex / AAA+ / DNA-binding protein / TRANSCRIPTION INITIATION / DNA OPENING / TRANSCRIPTION BUBBLE