[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 881 items for (author: beckmann & e)

EMDB-53230:
NMT1-NAC bound human RNC with full length ARF1 - State 1
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-53231:
NMT1-NAC bound human RNC with full length ARF1 - State 2
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-53232:
NMT1-NAC bound human RNC with full length ARF1 - alternative State
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-54528:
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-54529:
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-54530:
NAC bound human RNC with 58 amino acid ARF1-linker
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9qlo:
NMT1-NAC bound human RNC with full length ARF1 - State 1
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9qlp:
NMT1-NAC bound human RNC with full length ARF1 - State 2
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9qlq:
NMT1-NAC bound human RNC with full length ARF1 - alternative State
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9s3b:
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9s3c:
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9s3d:
NAC bound human RNC with 58 amino acid ARF1-linker
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-52581:
NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-52582:
NMT1-NAC bound human ribosome (combined translational states)
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9i2d:
NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
Method: single particle / : Denk T, Berninghausen O, Beckmann R

PDB-9i2e:
NMT1-NAC bound human ribosome (combined translational states)
Method: single particle / : Denk T, Berninghausen O, Beckmann R

EMDB-54140:
Cryo-EM map of the stalled 80S from the ZAK-bound human disome
Method: single particle / : Niu S, Beckmann R

EMDB-54141:
Cryo-EM map of the collided 80S from the ZAK-bound human disome
Method: single particle / : Niu S, Beckmann R

EMDB-54147:
Local refined map focusing on ZAK-RACK1 of the collided 80S
Method: single particle / : Niu S, Beckmann R

EMDB-54148:
Local refined cryo-EM map focusing on ZAK-RACK1 of the stalled 80S
Method: single particle / : Niu S, Beckmann R

EMDB-54149:
Cryo-EM map of the hybrid state translating 80S
Method: single particle / : Niu S, Beckmann R

EMDB-54150:
Cryo-EM map of the hibernating 80S
Method: single particle / : Niu S, Beckmann R

EMDB-54165:
Cryo-EM map of reconstituted ZAK-RBR-40S
Method: single particle / : Niu S, Beckmann R

EMDB-54166:
Cryo-EM map of the stalled 80S from ZAK-K394D-disome
Method: single particle / : Niu S, Beckmann R

EMDB-54167:
Cryo-EM map of the collided 80S from ZAK-K394D-disome
Method: single particle / : Niu S, Beckmann R

EMDB-54172:
Structure of the ZAK-bound human disome
Method: single particle / : Niu S, Beckmann R

EMDB-54236:
Structure of RACK1 bound to the C-terminus of SERBP1 and the RIH region of ZAK
Method: single particle / : Niu S, Beckmann R

PDB-9rpv:
Structure of the ZAK-bound human disome
Method: single particle / : Niu S, Beckmann R

PDB-9rsx:
Structure of RACK1 bound to the C-terminus of SERBP1 and the RIH region of ZAK
Method: single particle / : Niu S, Beckmann R

EMDB-50647:
Stalled 90S - Utp23-Krr1-deltaC3 - Consensus refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50648:
Stalled 90S - Utp23-Krr1-deltaC3 - Head-Kre33 module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50649:
Stalled 90S - Utp23-Krr1-deltaC3 - Krr1 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50650:
Stalled 90S - Utp23-Krr1-deltaC3 - Nop14 module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50651:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp10 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50652:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp12 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50653:
Stalled 90S - Utp23-Krr1-deltaC3 - Utp20 - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50654:
Stalled 90S - Utp23-Krr1-deltaC3 - UTP-A - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50958:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - 3' HACA - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50959:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - 5' HACA - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50960:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - Platform module - local refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50961:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3 - Consensus refinement
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50964:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50967:
snR30 snoRNP - Class 1 - Utp23-Krr1-wt
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50968:
snR30 snoRNP - State 2 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50969:
snR30 snoRNP - Class 2 - Utp23-Krr1-wt
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-50991:
Stalled 90S - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g25:
snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g28:
snR30 snoRNP - State 2 - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

PDB-9g33:
Stalled 90S - Utp23-Krr1-deltaC3
Method: single particle / : Thoms M, Berninghausen O, Beckmann R

EMDB-51916:
Structure of the outer membrane exopolysaccharide transporter PelBC
Method: single particle / : Benedens M, Rosales C, Beckmann R, Kedrov A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more