[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 119 items for (author: ayala & r)

EMDB-48572:
C12 local connector reconstruction of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48573:
C6 local connector reconstruction of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48599:
Connector structure of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48600:
Helical tail assembly of phage JohannRWettstein (Bas63)
Method: helical / : Hodgkinson-Bean J

PDB-9mt4:
Connector structure of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

PDB-9mt5:
Helical tail assembly of phage JohannRWettstein (Bas63)
Method: helical / : Hodgkinson-Bean J

EMDB-49251:
Icosahedral capsid assembly of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49262:
C3 baseplate consensus reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49263:
C6 baseplate consensus reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49264:
C3 baseplate puncture appratus focussed reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49265:
C3 baseplate wedge focussed reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49270:
C3 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49271:
C3 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49281:
Composite baseplate asymmetric unit of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49282:
C3 baseplate/tail composite map of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49284:
C6 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49292:
C6 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49482:
C6 baseplate/tail/fibers composite map of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-44474:
HIV-1 Env 16055 dGly4 NFL
Method: single particle / : Ozorowski G, Lee WH, Ward AB

PDB-9be9:
HIV-1 Env 16055 dGly4 NFL
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-45419:
Bacteriophage PhiTE extended tail
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45420:
Bacteriophage PhiTE contracted tail
Method: helical / : Hodgkinson-Bean J, Ayala R

EMDB-45435:
Bacteriophage PhiTE extended connector complex
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45436:
PhiTE C6 connector reconstruction
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45439:
PhiTE C12 connector reconstruction
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45486:
Reconstruction of PhiTE baseplate with C6 symmetry imposed
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45487:
Bacteriophage PhiTE baseplate with C3 symmetry imposed
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45488:
Bacteriophage PhiTE baseplate locally refined reconstruction with C6 symmetry imposed (particle subtraction and deep EM enhancing performed)
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45491:
Bacteriophage PhiTE baseplate reconstruction with C6 symmetry imposed
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45613:
Bacteriophage PhiTE full tail reconstruction with C3 symmetry imposed
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45937:
Bacteriophage PhiTE mature capsid
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-45953:
Bacteriophage PhiTE extended baseplate
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-48317:
Near complete virion structure of bacteriophage PhiTE
Method: single particle / : Hodgkinson-Bean J, Ayala R

PDB-9cb9:
Bacteriophage PhiTE extended tail
Method: single particle / : Hodgkinson-Bean J, Ayala R

PDB-9cba:
Bacteriophage PhiTE contracted tail
Method: helical / : Hodgkinson-Bean J, Ayala R

PDB-9cc7:
Bacteriophage PhiTE extended connector complex
Method: single particle / : Hodgkinson-Bean J, Ayala R

PDB-9cul:
Bacteriophage PhiTE mature capsid
Method: single particle / : Hodgkinson-Bean J, Ayala R

PDB-9cuy:
Bacteriophage PhiTE extended baseplate
Method: single particle / : Hodgkinson-Bean J, Ayala R

PDB-9mjn:
Near complete virion structure of bacteriophage PhiTE
Method: single particle / : Hodgkinson-Bean J, Ayala R

EMDB-44912:
Structure of gamma-glutamyl carboxylase (GGCX)
Method: single particle / : Wang R, Qi X

EMDB-44917:
Structure of GGCX-BGP complex
Method: single particle / : Wang R, Qi X

EMDB-44924:
Structure of GGCX-BGP-menaquinone-4 epoxide complex
Method: single particle / : Wang R, Qi X

PDB-9bum:
Structure of gamma-glutamyl carboxylase (GGCX)
Method: single particle / : Wang R, Qi X

PDB-9bur:
Structure of GGCX-BGP complex
Method: single particle / : Wang R, Qi X

PDB-9bux:
Structure of GGCX-BGP-menaquinone-4 epoxide complex
Method: single particle / : Wang R, Qi X

EMDB-34920:
Capsid of DT57C bacteriophage in the full state
Method: single particle / : Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M

EMDB-34949:
Capsid of DT57C bacteriophage in the empty state
Method: single particle / : Ayala R, Moiseenko AV, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M

EMDB-34952:
Neck of DT57C bacteriophage in the full state
Method: single particle / : Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M

EMDB-34955:
Baseplate of DT57C bacteriophage in the full state
Method: single particle / : Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M

EMDB-34968:
Straight fiber of DT57C bacteriophage in the full state
Method: single particle / : Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more