Author results

3A5X
  • Download 3a5x
  • View 3a5x
Molmil generated image of 3a5x
L-TYPE STRAIGHT FLAGELLAR FILAMENT MADE OF FULL-LENGTH FLAGELLIN
Descriptor:Flagellin
Authors:Maki-Yonekura, S., Yonekura, K., Namba, K.
Deposit date:2009-08-13
Release date:2010-03-16
Last modified:2013-10-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational change of flagellin for polymorphic supercoiling of the flagellar filament
Nat.Struct.Mol.Biol., 17, 2010
1UCU
  • Download 1ucu
  • View 1ucu
Molmil generated image of 1ucu
R-TYPE STRAIGHT FLAGELLAR FILAMENT MADE OF FULL-LENGTH FLAGELLIN
Descriptor:phase 1 Flagellin
Authors:Yonekura, K., Maki-Yonekura, S., Namba, K.
Deposit date:2003-04-22
Release date:2003-08-12
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Complete atomic model of the bacterial flagellar filament by electron cryomicroscopy
NATURE, 424, 2003
5ZFP
  • Download 5zfp
  • View 5zfp
Molmil generated image of 5zfp
STRUCTURE OF THE EXBB/EXBD HEXAMERIC COMPLEX
Descriptor:Biopolymer transport protein ExbB
Authors:Maki-Yonekura, S., Matsuoka, R., Yonekura, K.
Deposit date:2018-03-06
Release date:2018-05-09
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.
Elife, 7, 2018
5ZFU
  • Download 5zfu
  • View 5zfu
Molmil generated image of 5zfu
STRUCTURE OF THE EXBB/EXBD HEXAMERIC COMPLEX (EXBB6EXBD3TM)
Descriptor:Biopolymer transport protein ExbB, 22-mer peptide from Biopolymer transport protein ExbD
Authors:Yonekura, K., Yamashita, Y., Matsuoka, R., Maki-Yonekura, S.
Deposit date:2018-03-07
Release date:2018-05-09
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.
Elife, 7, 2018
5ZFV
  • Download 5zfv
  • View 5zfv
Molmil generated image of 5zfv
STRUCTURE OF THE EXBB/EXBD PENTAMERIC COMPLEX (EXBB5EXBD1TM)
Descriptor:Biopolymer transport protein ExbB, 22-mer peptide from Biopolymer transport protein ExbD
Authors:Yonekura, K., Yamashita, Y., Matsuoka, R., Maki-Yonekura, S.
Deposit date:2018-03-07
Release date:2018-05-09
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Hexameric and pentameric complexes of the ExbBD energizer in the Ton system.
Elife, 7, 2018
6JNT
  • Download 6jnt
  • View 6jnt
Molmil generated image of 6jnt
CATALASE STRUCTURE DETERMINED BY EEFD (DATASET 1)
Descriptor:Catalase, PROTOPORPHYRIN IX CONTAINING FE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yonekura, K., Maki-Yonekura, S.
Deposit date:2019-03-18
Release date:2019-04-24
Last modified:2019-05-22
Method:ELECTRON CRYSTALLOGRAPHY (3 Å)
Cite:A new cryo-EM system for electron 3D crystallography by eEFD.
J.Struct.Biol., 206, 2019
6JNU
  • Download 6jnu
  • View 6jnu
Molmil generated image of 6jnu
CATALASE STRUCTURE DETERMINED BY EEFD (DATASET 2)
Descriptor:Catalase, PROTOPORPHYRIN IX CONTAINING FE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yonekura, K., Maki-Yonekura, S.
Deposit date:2019-03-18
Release date:2019-04-24
Last modified:2019-05-22
Method:ELECTRON CRYSTALLOGRAPHY (3.001 Å)
Cite:A new cryo-EM system for electron 3D crystallography by eEFD.
J.Struct.Biol., 206, 2019
3AR2
  • Download 3ar2
  • View 3ar2
Molmil generated image of 3ar2
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND AMPPCP AND CA2+
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR3
  • Download 3ar3
  • View 3ar3
Molmil generated image of 3ar3
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND ADP AND TG
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, MAGNESIUM ION, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR4
  • Download 3ar4
  • View 3ar4
Molmil generated image of 3ar4
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND ATP AND TG IN THE ABSENCE OF CA2+
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR5
  • Download 3ar5
  • View 3ar5
Molmil generated image of 3ar5
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND TNP-AMP AND TG
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR6
  • Download 3ar6
  • View 3ar6
Molmil generated image of 3ar6
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND TNP-ADP AND TG IN THE ABSENCE OF CALCIUM
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, MAGNESIUM ION, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+.
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR7
  • Download 3ar7
  • View 3ar7
Molmil generated image of 3ar7
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND TNP-ATP AND TG IN THE ABSENCE OF CA2+
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR8
  • Download 3ar8
  • View 3ar8
Molmil generated image of 3ar8
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND ALF4, TNP-AMP AND TG
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, MAGNESIUM ION, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AR9
  • Download 3ar9
  • View 3ar9
Molmil generated image of 3ar9
CALCIUM PUMP CRYSTAL STRUCTURE WITH BOUND BEF3, TNP-AMP AND TG IN THE ABSENCE OF CALCIUM
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, SODIUM ION, MAGNESIUM ION, ...
Authors:Toyoshima, C., Yonekura, S., Tsueda, J., Iwasawa, S.
Deposit date:2010-11-24
Release date:2011-02-02
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3VU3
  • Download 3vu3
  • View 3vu3
Molmil generated image of 3vu3
CRYSTAL STRUCTURE OF THE HFQ AND CATALASE HPII COMPLEX
Descriptor:Catalase HPII, Protein hfq, PROTOPORPHYRIN IX CONTAINING FE
Authors:Watanabe, M., Yonekura, K.
Deposit date:2012-06-15
Release date:2013-11-20
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Post-Transcriptional Regulator Hfq Binds Catalase HPII: Crystal Structure of the Complex
Plos One, 8, 2013
5GTH
  • Download 5gth
  • View 5gth
Molmil generated image of 5gth
NATIVE XFEL STRUCTURE OF PHOTOSYSTEM II (DARK DATASET)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2016-08-20
Release date:2017-03-15
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
5GTI
  • Download 5gti
  • View 5gti
Molmil generated image of 5gti
NATIVE XFEL STRUCTURE OF PHOTOSYSTEM II (TWO FLASH DATASET)
Descriptor:Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2016-08-20
Release date:2017-03-15
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
5WS5
  • Download 5ws5
  • View 5ws5
Molmil generated image of 5ws5
NATIVE XFEL STRUCTURE OF PHOTOSYSTEM II (PREFLASH DARK DATASET)
Descriptor:Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2016-12-05
Release date:2017-03-15
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
5WS6
  • Download 5ws6
  • View 5ws6
Molmil generated image of 5ws6
NATIVE XFEL STRUCTURE OF PHOTOSYSTEM II (PREFLASH TWO-FLASH DATASET
Descriptor:Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 chlorophyll protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2016-12-05
Release date:2017-03-15
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
6JLJ
  • Download 6jlj
  • View 6jlj
Molmil generated image of 6jlj
XFEL STRUCTURE OF CYANOBACTERIAL PHOTOSYSTEM II (DARK STATE, DATASET1)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
6JLK
  • Download 6jlk
  • View 6jlk
Molmil generated image of 6jlk
XFEL STRUCTURE OF CYANOBACTERIAL PHOTOSYSTEM II (1F STATE, DATASET1)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
6JLL
  • Download 6jll
  • View 6jll
Molmil generated image of 6jll
XFEL STRUCTURE OF CYANOBACTERIAL PHOTOSYSTEM II (2F STATE, DATASET1)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
6JLM
  • Download 6jlm
  • View 6jlm
Molmil generated image of 6jlm
XFEL STRUCTURE OF CYANOBACTERIAL PHOTOSYSTEM II (DARK STATE, DATASET2)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
6JLN
  • Download 6jln
  • View 6jln
Molmil generated image of 6jln
XFEL STRUCTURE OF CYANOBACTERIAL PHOTOSYSTEM II (1F STATE, DATASET2)
Descriptor:Photosystem II protein D1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Suga, M., Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
<12>