Author results

3KLR
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BOVINE H-PROTEIN AT 0.88 ANGSTROM RESOLUTION
Descriptor:Glycine cleavage system H protein, SULFATE ION, GLYCEROL
Authors:Higashiura, A., Kurakane, T., Matsuda, M., Suzuki, M., Inaka, K., Sato, M., Tanaka, H., Fujiwara, K., Nakagawa, A.
Deposit date:2009-11-09
Release date:2010-06-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
5X9L
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RECOMBINANT THAUMATIN I AT 0.9 ANGSTROM
Descriptor:Thaumatin I, L(+)-TARTARIC ACID, GLYCEROL
Authors:Masuda, T., Okubo, K., Sugahara, M., Suzuki, M., Mikami, B.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
3W7Y
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0.92A STRUCTURE OF 2ZN HUMAN INSULIN AT 100K
Descriptor:Insulin, ZINC ION
Authors:Sakabe, N., Sakabe, K., Sasaki, K., Murayoshi, M.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:0.92A structure of 2Zn human insulin at 100K
To be Published
3WGX
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CRYSTAL STRUCTURE OF ERP46 TRX2 IN A COMPLEX WITH PRX4 C-TERM
Descriptor:Thioredoxin domain-containing protein 5, Peroxiredoxin-4, GLYCEROL
Authors:Inaba, K., Suzuki, M., Kojima, R.
Deposit date:2013-08-13
Release date:2014-06-25
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
5X9M
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STRUCTURE OF HYPER-SWEET THAUMATIN (D21N)
Descriptor:Thaumatin I, L(+)-TARTARIC ACID, GLYCEROL
Authors:Masuda, T., Okubo, K., Sugahara, M., Suzuki, M., Mikami, B.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
3WGE
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CRYSTAL STRUCTURE OF ERP46 TRX2
Descriptor:Thioredoxin domain-containing protein 5, GLYCEROL
Authors:Inaba, K., Suzuki, M., Kojima, R.
Deposit date:2013-08-04
Release date:2014-06-25
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
1GQV
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ATOMIC RESOLUTION (0.98A) STRUCTURE OF EOSINOPHIL-DERIVED NEUROTOXIN
Descriptor:EOSINOPHIL-DERIVED NEUROTOXIN, ACETATE ION
Authors:Swaminathan, G.J., Holloway, D.E., Veluraja, K., Acharya, K.R.
Deposit date:2001-12-05
Release date:2002-03-08
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Atomic Resolution (0.98 A) Structure of Eosinophil-Derived Neurotoxin
Biochemistry, 41, 2002
2ZPM
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CRYSTAL STRUCTURE ANALYSIS OF PDZ DOMAIN B
Descriptor:Regulator of sigma E protease
Authors:Inaba, K., Suzuki, M.
Deposit date:2008-07-17
Release date:2008-10-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Crystal Structure analysis of PDZ-domain B
To be Published
5KXV
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STRUCTURE PROTEINASE K AT 0.98 ANGSTROMS
Descriptor:Proteinase K, NITRATE ION, GLYCEROL, ...
Authors:Masuda, T., Suzuki, M., Inoue, S., Numata, K., Sugahara, M.
Deposit date:2016-07-20
Release date:2017-06-07
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Atomic resolution structure of serine protease proteinase K at ambient temperature.
Sci Rep, 7, 2017
5YYP
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STRUCTURE K137A THAUMATIN
Descriptor:Preprothaumatin I, L(+)-TARTARIC ACID, GLYCEROL
Authors:Masuda, T., Kigo, S., Mitsumoto, M., Ohta, K., Suzuki, M., Mikami, B., Kitabatake, N., Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
2CZQ
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A NOVEL CUTINASE-LIKE PROTEIN FROM CRYPTOCOCCUS SP.
Descriptor:cutinase-like protein, CITRIC ACID, 1,2-ETHANEDIOL
Authors:Masaki, K., Kamini, N.R., Ikeda, H., Iefuji, H., Kondo, H., Suzuki, M., Tsuda, S.
Deposit date:2005-07-14
Release date:2006-07-14
Last modified:2012-06-13
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Crystal structure and enhanced activity of a cutinase-like enzyme from Cryptococcus sp. strain S-2
Proteins, 77, 2009
5YYQ
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STRUCTURE K78A THAUMATIN
Descriptor:Preprothaumatin I, L(+)-TARTARIC ACID, GLYCEROL
Authors:Masuda, T., Kigo, S., Mitsumoto, M., Ohta, K., Suzuki, M., Mikami, B., Kitabatake, N., Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
5YYR
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STRUCTURE K106A THAUMATIN
Descriptor:Preprothaumatin I, L(+)-TARTARIC ACID, GLYCEROL
Authors:Masuda, T., Kigo, S., Ohta, K., Mitsumoto, M., Mikami, B., Suzuki, M., Kitabatake, N., Tani, F.
Deposit date:2017-12-10
Release date:2018-03-21
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Positive Charges on the Surface of Thaumatin Are Crucial for the Multi-Point Interaction with the Sweet Receptor.
Front Mol Biosci, 5, 2018
3WA2
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HIGH RESOLUTION CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
5SW1
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THAUMATIN STRUCTURE AT PH 6.0
Descriptor:Thaumatin I, (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Thaumatin Structure at pH 6.0
To Be Published
3W7Z
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1.15A STRUCTURE OF HUMAN 2ZN INSULIN AT 293K
Descriptor:Insulin, ZINC ION
Authors:Hoshikawa, N., Sasaki, K., Sakabe, N., Sakabe, K.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:1.15A structure of human 2Zn insulin at 293K
To be Published
3VQF
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CRYSTAL STRUCTURE ANALYSIS OF THE PDZ DOMAIN DERIVED FROM THE TIGHT JUNCTION REGULATING PROTEIN
Descriptor:E3 ubiquitin-protein ligase LNX
Authors:Akiyoshi, Y., Hamada, D., Goda, N., Tenno, T., Narita, H., Nakagawa, A., Furuse, M., Suzuki, M., Hiroaki, H.
Deposit date:2012-03-22
Release date:2013-03-27
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
4YSE
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HIGH RESOLUTION SYNCHROTRON STRUCTURE OF COPPER NITRITE REDUCTASE FROM ALCALIGENES FAECALIS
Descriptor:Copper-containing nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-03-09
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016
5KXU
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STRUCTURE PROTEINASE K DETERMINED BY SACLA
Descriptor:Proteinase K, CALCIUM ION, NITRATE ION
Authors:Masuda, T., Suzuki, M., Inoue, S., Numata, K., Sugahara, M.
Deposit date:2016-07-20
Release date:2017-06-07
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic resolution structure of serine protease proteinase K at ambient temperature.
Sci Rep, 7, 2017
5SW2
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THAUMATIN STRUCTURE AT PH 6.0, ORTHORHOMBIC TYPE1
Descriptor:Thaumatin I, GLYCEROL
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Thaumatin Structure at pH 6.0, orthorhombic type1
To Be Published
5ZG2
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CRYSTAL STRUCTURE OF THE GLUA2O LBD IN COMPLEX WITH ZK200775 AND COMPOUND-2
Descriptor:Glutamate receptor 2, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid, 9-(4-~{tert}-butylphenyl)-3,4-dihydropyrido[2,1-c][1,2,4]thiadiazine 2,2-dioxide, ...
Authors:Sogabe, S., Igaki, S., Hirokawa, A., Zama, Y., Lane, W., Snell, G.
Deposit date:2018-03-07
Release date:2019-01-16
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:TAK-137, an AMPA-R potentiator with little agonistic effect, has a wide therapeutic window.
Neuropsychopharmacology, 44, 2019
5SW0
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THAUMATIN STRUCTURE AT PH 4.0
Descriptor:Thaumatin I, PHOSPHATE ION
Authors:Masuda, T., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.269 Å)
Cite:Thaumatin Structure at pH 4.0
To Be Published
5GQP
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THAUMATIN STRUCTURE AT PH 8.0, ORTHORHOMBIC TYPE1
Descriptor:Thaumatin I
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.296 Å)
Cite:Thaumatin Structure at pH 8.0, orthorhombic type1
To Be Published
1ISP
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CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LIPASE AT 1.3A RESOLUTION
Descriptor:lipase, GLYCEROL
Authors:Kawasaki, K., Kondo, H., Suzuki, M., Ohgiya, S., Tsuda, S.
Deposit date:2001-12-19
Release date:2002-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Alternate conformations observed in catalytic serine of Bacillus subtilis lipase determined at 1.3 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
5D4H
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HIGH-RESOLUTION NITRITE COMPLEX OF A COPPER NITRITE REDUCTASE DETERMINED BY SYNCHROTRON RADIATION CRYSTALLOGRAPHY
Descriptor:Copper-containing nitrite reductase, COPPER (II) ION, NITRITE ION, ...
Authors:Fukuda, Y., Tse, K.M., Nakane, T., Nakatsu, T., Suzuki, M., Sugahara, M., Inoue, S., Masuda, T., Yumoto, F., Matsugaki, N., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Murphy, M.E.P., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-08-07
Release date:2016-03-09
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016