Author results

1YKQ
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CRYSTAL STRUCTURE OF DIELS-ALDER RIBOZYME
Descriptor:Diels-Alder ribozyme, CADMIUM ION, MAGNESIUM ION
Authors:Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
Deposit date:2005-01-18
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
1YKV
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CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE
Descriptor:Diels-Alder ribozyme, (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION
Authors:Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
Deposit date:2005-01-18
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
1YLS
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CRYSTAL STRUCTURE OF SELENIUM-MODIFIED DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE
Descriptor:RNA Diels-Alder ribozyme, (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION
Authors:Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
Deposit date:2005-01-19
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
1Y26
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A-RIBOSWITCH-ADENINE COMPLEX
Descriptor:Vibrio vulnificus A-riboswitch, MAGNESIUM ION, ADENINE
Authors:Serganov, A., Yuan, Y.R., Patel, D.J.
Deposit date:2004-11-20
Release date:2004-12-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Discriminative Regulation of Gene Expression by Adenine- and Guanine-Sensing mRNAs
Chem.Biol., 11, 2004
1Y27
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G-RIBOSWITCH-GUANINE COMPLEX
Descriptor:Bacillus subtilis xpt, HYPOPHOSPHITE, GUANOSINE-5'-MONOPHOSPHATE
Authors:Serganov, A., Yuan, Y.R., Patel, D.J.
Deposit date:2004-11-20
Release date:2004-12-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Discriminative Regulation of Gene Expression by Adenine- and Guanine-Sensing mRNAs
Chem.Biol., 11, 2004
2GDI
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CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE
Descriptor:TPP riboswitch, SODIUM ION, POTASSIUM ION, ...
Authors:Serganov, A.
Deposit date:2006-03-16
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch.
Nature, 441, 2006
4GXY
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RNA STRUCTURE
Descriptor:Adenosylcobalamin riboswitch, Adenosylcobalamin, IRIDIUM HEXAMMINE ION, ...
Authors:Serganov, A., Peselis, A.
Deposit date:2012-09-04
Release date:2012-10-17
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural insights into ligand binding and gene expression control by an adenosylcobalamin riboswitch.
Nat.Struct.Mol.Biol., 19, 2012
2LA5
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RNA DUPLEX-QUADRUPLEX JUNCTION COMPLEX WITH FMRP RGG PEPTIDE
Descriptor:RNA (36-MER), Fragile X mental retardation 1 protein
Authors:Phan, A., Kuryavyi, V., Darnell, J., Serganov, A., Majumdar, A., Ilin, S., Darnell, R., Patel, D.
Deposit date:2011-03-03
Release date:2011-06-08
Last modified:2011-07-20
Method:SOLUTION NMR
Cite:Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction.
Nat.Struct.Mol.Biol., 18, 2011
1AB3
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RIBOSOMAL PROTEIN S15 FROM THERMUS THERMOPHILUS, NMR, 26 STRUCTURES
Descriptor:RIBOSOMAL RNA BINDING PROTEIN S15
Authors:Berglund, H., Rak, A., Serganov, A., Garber, M., Hard, T.
Deposit date:1997-02-03
Release date:1997-04-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the ribosomal RNA binding protein S15 from Thermus thermophilus.
Nat.Struct.Biol., 4, 1997
1DK1
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DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
Descriptor:RRNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ...
Authors:Nikulin, A., Serganov, A., Ennifar, E., Tischenko, S., Nevskaya, N.
Deposit date:1999-12-06
Release date:2000-04-02
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
1F7Y
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THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
Descriptor:16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ...
Authors:Ennifar, E., Nikouline, A., Serganov, A., Tishchenko, S., Nevskaya, N., Garber, M., Ehresmann, B., Ehresmann, C., Nikonov, S., Dumas, P.
Deposit date:2000-06-28
Release date:2000-11-22
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of UUCG tetraloop.
J.Mol.Biol., 304, 2000
3SKI
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'-DEOXYGUANOSINE
Descriptor:RNA (68-MER), 2'-DEOXY-GUANOSINE, MAGNESIUM ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-22
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKL
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'-DEOXYGUANOSINE, IRIDIUM HEXAMMINE SOAK
Descriptor:RNA (66-MER), 2'-DEOXY-GUANOSINE, MAGNESIUM ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-22
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKR
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'- DEOXYGUANOSINE, COBALT HEXAMMINE SOAK
Descriptor:RNA (66-MER), 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-23
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKT
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'- DEOXYGUANOSINE, MANGANESE SOAK
Descriptor:RNA (66-MER), 2'-DEOXY-GUANOSINE, MANGANESE (II) ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-23
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKW
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO 2'- DEOXYGUANOSINE, CESIUM SOAK
Descriptor:RNA (66-MER), 2'-DEOXY-GUANOSINE, CESIUM ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-23
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKZ
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO GUANOSINE
Descriptor:RNA (68-MER), GUANOSINE, MAGNESIUM ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-23
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.605 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SLQ
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CRYSTAL STRUCTURE OF THE 2'- DEOXYGUANOSINE RIBOSWITCH BOUND TO GUANOSINE-5'-MONOPHOSPHATE
Descriptor:RNA (68-MER), GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Pikovskaya, O., Polonskaia, A., Patel, D.J., Serganov, A.
Deposit date:2011-06-24
Release date:2011-08-17
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
4QK8
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THERMOANAEROBACTER PSEUDETHANOLICUS C-DI-AMP RIBOSWITCH
Descriptor:C-di-AMP riboswitch, (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, ...
Authors:Gao, A., Serganov, A.
Deposit date:2014-06-05
Release date:2014-08-06
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol., 10, 2014
4QK9
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THERMOVIRGA LIENII C-DI-AMP RIBOSWITCH
Descriptor:C-di-AMP riboswitch, (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION
Authors:Gao, A., Serganov, A.
Deposit date:2014-06-05
Release date:2014-08-06
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol., 10, 2014
4QKA
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C-DI-AMP RIBOSWITCH FROM THERMOANAEROBACTER PSEUDETHANOLICUS, IRIDIUM HEXAMINE SOAK
Descriptor:C-di-AMP riboswitch, (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, ...
Authors:Gao, A., Serganov, A.
Deposit date:2014-06-05
Release date:2014-08-06
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol., 10, 2014
5DE5
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN HUMAN FMRP RGG MOTIF AND G-QUADRUPLEX RNA.
Descriptor:sc1, Fragile X mental retardation protein 1, POTASSIUM ION
Authors:Vasilyev, N., Polonskaia, A., Darnell, J.C., Darnell, R.B., Patel, D.J., Serganov, A.
Deposit date:2015-08-25
Release date:2015-09-23
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (3.0011 Å)
Cite:Crystal structure reveals specific recognition of a G-quadruplex RNA by a beta-turn in the RGG motif of FMRP.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DE8
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN HUMAN FMRP RGG MOTIF AND G-QUADRUPLEX RNA, IRIDIUM HEXAMMINE BOUND FORM.
Descriptor:sc1, Fragile X mental retardation protein 1, POTASSIUM ION, ...
Authors:Vasilyev, N., Polonskaia, A., Darnell, J.C., Darnell, R.B., Patel, D.J., Serganov, A.
Deposit date:2015-08-25
Release date:2015-09-23
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (3.1003 Å)
Cite:Crystal structure reveals specific recognition of a G-quadruplex RNA by a beta-turn in the RGG motif of FMRP.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DEA
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN HUMAN FMRP RGG MOTIF AND G-QUADRUPLEX RNA, CESIUM BOUND FORM.
Descriptor:sc1, Fragile X mental retardation protein 1, POTASSIUM ION, ...
Authors:Vasilyev, N., Polonskaia, A., Darnell, J.C., Darnell, R.B., Patel, D.J., Serganov, A.
Deposit date:2015-08-25
Release date:2015-09-23
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.7973 Å)
Cite:Crystal structure reveals specific recognition of a G-quadruplex RNA by a beta-turn in the RGG motif of FMRP.
Proc.Natl.Acad.Sci.USA, 112, 2015
6D13
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CRYSTAL STRUCTURE OF E.COLI RPPH-DAPF COMPLEX
Descriptor:Diaminopimelate epimerase, RNA pyrophosphohydrolase, IODIDE ION, ...
Authors:Gao, A., Serganov, A.
Deposit date:2018-04-11
Release date:2018-05-23
Last modified:2018-08-08
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF.
Nucleic Acids Res., 46, 2018
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