1AN7 | |
1CJS | | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L1 FROM METHANOCOCCUS JANNASCHII | | Descriptor: | 50S RIBOSOMAL PROTEIN L1P | | Authors: | Nevskaya, N., Tishchenko, S., Fedorov, R., Al-Karadaghi, S., Liljas, A., Kraft, A., Piendl, W., Garber, M., Nikonov, S. | | Deposit date: | 1999-04-19 | | Release date: | 2000-05-31 | | Last modified: | 2018-03-07 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Archaeal ribosomal protein L1: the structure provides new insights into RNA binding of the L1 protein family.
Structure Fold.Des., 8, 2000
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1U63 | | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | | Descriptor: | 49 NT FRAGMENT OF MRNA FOR L1, 50S ribosomal protein L1P | | Authors: | Nevskaya, N., Tishchenko, S., Gabdoulkhakov, A., Nikonova, E., Nikonov, O., Nikulin, A., Garber, M., Nikonov, S., Piendl, W. | | Deposit date: | 2004-07-29 | | Release date: | 2005-04-12 | | Last modified: | 2016-11-30 | | Method: | X-RAY DIFFRACTION (3.4 Å) | | Cite: | Ribosomal protein L1 recognizes the same specific structural motif in its target sites on the autoregulatory mRNA and 23S rRNA.
Nucleic Acids Res., 33, 2005
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1ZHO | | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1 IN COMPLEX WITH MRNA | | Descriptor: | mRNA, 50S ribosomal protein L1, POTASSIUM ION | | Authors: | Nevskaya, N., Tishchenko, S., Volchkov, S., Kljashtorny, V., Nikonova, E., Nikonov, O., Nikulin, A., Kohrer, C., Piendl, W., Zimmermann, R., Stockley, P., Garber, M., Nikonov, S. | | Deposit date: | 2005-04-26 | | Release date: | 2006-05-09 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | New insights into the interaction of ribosomal protein L1 with RNA.
J.Mol.Biol., 355, 2006
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1I6U | | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | | Descriptor: | 16S RRNA FRAGMENT, 30S RIBOSOMAL PROTEIN S8P, SULFATE ION | | Authors: | Tishchenko, S., Nikulin, A., Fomenkova, N., Nevskaya, N., Nikonov, O., Dumas, P., Moine, H., Ehresmann, B., Ehresmann, C., Piendl, W., Lamzin, V., Garber, M., Nikonov, S. | | Deposit date: | 2001-03-05 | | Release date: | 2001-08-03 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii.
J.Mol.Biol., 311, 2001
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1AD2 | | RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE | | Descriptor: | RIBOSOMAL PROTEIN L1, SULFATE ION, MERCURY (II) ION, ... | | Authors: | Unge, J., Al-Karadaghi, S., Liljas, A., Jonsson, B.-H., Eliseikina, I., Ossina, N., Nevskaya, N., Fomenkova, N., Garber, M., Nikonov, S. | | Deposit date: | 1997-02-20 | | Release date: | 1997-05-15 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | A mutant form of the ribosomal protein L1 reveals conformational flexibility.
FEBS Lett., 411, 1997
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1BXE | | RIBOSOMAL PROTEIN L22 FROM THERMUS THERMOPHILUS | | Descriptor: | PROTEIN (RIBOSOMAL PROTEIN L22), CHLORIDE ION | | Authors: | Unge, J., Aberg, A., Al-Karadaghi, S., Nikulin, A., Nikonov, S., Davydova, N., Nevskaya, N., Garber, M., Liljas, A. | | Deposit date: | 1998-10-02 | | Release date: | 1998-10-07 | | Last modified: | 2018-03-14 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | The crystal structure of ribosomal protein L22 from Thermus thermophilus: insights into the mechanism of erythromycin resistance.
Structure, 6, 1998
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1MZP | | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | | Descriptor: | fragment of 23S rRNA, 50s ribosomal protein L1P, MAGNESIUM ION | | Authors: | Nikulin, A., Eliseikina, I., Tishchenko, S., Nevskaya, N., Davydova, N., Platonova, O., Piendl, W., Selmer, M., Liljas, A., Zimmermann, R., Garber, M., Nikonov, S. | | Deposit date: | 2002-10-09 | | Release date: | 2003-01-21 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.65 Å) | | Cite: | Structure of the L1 protuberance in the ribosome.
Nat.Struct.Biol., 10, 2003
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2OUM | | THE FIRST DOMAIN OF L1 FROM THERMUS THERMOPHILUS | | Descriptor: | 50S ribosomal protein L1 | | Authors: | Kljashtorny, V., Tishchenko, S., Nevskaya, N., Nikonov, S., Davydova, N., Garber, M. | | Deposit date: | 2007-02-12 | | Release date: | 2008-02-26 | | Last modified: | 2017-08-02 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
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2OV7 | | THE FIRST DOMAIN OF THE RIBOSOMAL PROTEIN L1 FROM THERMUS THERMOPHILUS | | Descriptor: | 50S ribosomal protein L1 | | Authors: | Kljashtorny, V., Tishchenko, S., Nevskaya, N., Nikonov, S., Davydova, N., Garber, M. | | Deposit date: | 2007-02-13 | | Release date: | 2007-12-25 | | Last modified: | 2017-08-02 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
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1BXY | | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L30 FROM THERMUS THERMOPHILUS AT 1.9 A RESOLUTION: CONFORMATIONAL FLEXIBILITY OF THE MOLECULE. | | Descriptor: | PROTEIN (RIBOSOMAL PROTEIN L30) | | Authors: | Fedorov, R., Nevskaya, N., Khairullina, A., Tishchenko, S., Mikhailov, A., Garber, M., Nikonov, S. | | Deposit date: | 1998-10-09 | | Release date: | 1998-10-14 | | Last modified: | 2018-03-07 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structure of ribosomal protein L30 from Thermus thermophilus at 1.9 A resolution: conformational flexibility of the molecule.
Acta Crystallogr.,Sect.D, 55, 1999
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1DK1 | | DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX | | Descriptor: | RRNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ... | | Authors: | Nikulin, A., Serganov, A., Ennifar, E., Tischenko, S., Nevskaya, N. | | Deposit date: | 1999-12-06 | | Release date: | 2000-04-02 | | Last modified: | 2018-01-31 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
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1F7Y | | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | | Descriptor: | 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ... | | Authors: | Ennifar, E., Nikouline, A., Serganov, A., Tishchenko, S., Nevskaya, N., Garber, M., Ehresmann, B., Ehresmann, C., Nikonov, S., Dumas, P. | | Deposit date: | 2000-06-28 | | Release date: | 2000-11-22 | | Last modified: | 2011-12-28 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | The crystal structure of UUCG tetraloop.
J.Mol.Biol., 304, 2000
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1MJI | | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | | Descriptor: | 5S rRNA fragment, 50S ribosomal protein L5, MAGNESIUM ION, ... | | Authors: | Perederina, A., Nevskaya, N., Nikonov, O., Nikulin, A., Dumas, P., Yao, M., Tanaka, I., Garber, M., Gongadze, G., Nikonov, S. | | Deposit date: | 2002-08-28 | | Release date: | 2003-01-21 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Detailed analysis of RNA-protein interactions within the bacterial ribosomal
protein L5/5S rRNA complex
RNA, 8, 2002
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1RIS | | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN S6 FROM THERMUS THERMOPHILUS | | Descriptor: | RIBOSOMAL PROTEIN S6 | | Authors: | Lindahl, M., Svensson, L.A., Liljas, A., Sedelnikova, S.E., Eliseikina, I.A., Fomenkova, N.P., Nevskaya, N., Nikonov, S.V., Garber, M.B., Muranova, T.A., Rykonova, A.I., Amons, R. | | Deposit date: | 1994-05-31 | | Release date: | 1994-09-30 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Crystal structure of the ribosomal protein S6 from Thermus thermophilus.
EMBO J., 13, 1994
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2HW8 | | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | | Descriptor: | 36-MER, 50S ribosomal protein L1, MAGNESIUM ION, ... | | Authors: | Tishchenko, S., Nikonova, E., Nikulin, A., Nevskaya, N., Volchkov, S., Piendl, W., Garber, M., Nikonov, S. | | Deposit date: | 2006-08-01 | | Release date: | 2006-12-19 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of the ribosomal protein L1-mRNA complex at 2.1 A resolution: common features of crystal packing of L1-RNA complexes.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
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2VPL | | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | | Descriptor: | 50S RIBOSOMAL PROTEIN L1, FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE, POTASSIUM ION | | Authors: | Kljashtorny, V., Tishchenko, S., Nevskaya, N., Nikonov, S., Garber, M. | | Deposit date: | 2008-03-01 | | Release date: | 2008-09-23 | | Last modified: | 2019-07-24 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Domain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA.
J. Mol. Biol., 383, 2008
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6H6K | | THE STRUCTURE OF THE FKR MUTANT OF THE ARCHAEAL TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT IN COMPLEX WITH GDPCP, OBTAINED IN THE ABSENCE OF MAGNESIUM SALTS IN THE CRYSTALLIZATION SOLUTION. | | Descriptor: | Translation initiation factor 2 subunit gamma, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, SODIUM ION, ... | | Authors: | Nikonov, O., Kravchenko, O., Nevskaya, N., Stolboushkina, E., Gabdulkhakov, A., Garber, M., Nikonov, S. | | Deposit date: | 2018-07-27 | | Release date: | 2019-04-17 | | Last modified: | 2019-04-24 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome.
Acta Crystallogr D Struct Biol, 75, 2019
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1KUQ | | CRYSTAL STRUCTURE OF T3C MUTANT S15 RIBOSOMAL PROTEIN IN COMPLEX WITH 16S RRNA | | Descriptor: | 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, SULFATE ION | | Authors: | Nikulin, A.D., Tishchenko, S., Revtovich, S., Ehresmann, B., Ehresmann, C., Dumas, P., Garber, M., Nikonov, S., Nevskaya, N. | | Deposit date: | 2002-01-22 | | Release date: | 2003-06-24 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.84 Å) | | Cite: | Role of N-terminal helix in interaction of ribosomal protein S15 with 16S rRNA.
Biochemistry Mosc., 69, 2004
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1I2A | |
1FEU | | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | | Descriptor: | 19 NT FRAGMENT OF 5S RRNA, 21 NT FRAGMENT OF 5S RRNA, 50S RIBOSOMAL PROTEIN L25, ... | | Authors: | Fedorov, R.V., Meshcheryakov, V.A., Gongadze, G.M., Fomenkova, N.P., Nevskaya, N.A., Selmer, M., Laurberg, M., Kristensen, O., Al-Karadaghi, S., Liljas, A., Garber, M.B., Nikonov, S.V. | | Deposit date: | 2000-07-23 | | Release date: | 2001-06-25 | | Last modified: | 2017-10-04 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins.
Acta Crystallogr.,Sect.D, 57, 2001
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2RFV | | HIGH RESOLUTION STRUCTURE OF L-METHIONINE GAMMA-LYASE FROM CITROBACTER FREUNDII | | Descriptor: | Methionine gamma-lyase, CHLORIDE ION | | Authors: | Nikulin, A.D., Revtovich, S.V., Morozova, E.A., Nevskaya, N.A., Nikonov, S.V., Garber, M.B., Demidkina, T.V. | | Deposit date: | 2007-10-02 | | Release date: | 2008-08-19 | | Last modified: | 2017-10-25 | | Method: | X-RAY DIFFRACTION (1.355 Å) | | Cite: | High-resolution structure of methionine gamma-lyase from Citrobacter freundii.
Acta Crystallogr.,Sect.D, 64, 2008
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3TG8 | | MUTANT RIBOSOMAL PROTEIN L1 LACKING ALA158 FROM THERMUS THERMOPHILUS | | Descriptor: | 50S ribosomal protein L1, TETRAETHYLENE GLYCOL, CHLORIDE ION | | Authors: | Gabdulkhakov, A.G., Nevskaya, N.A., Nikonov, S.V. | | Deposit date: | 2011-08-17 | | Release date: | 2011-12-07 | | Last modified: | 2012-04-11 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Structural analysis of interdomain mobility in ribosomal L1 proteins.
Acta Crystallogr.,Sect.D, 67, 2011
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3U4M | | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TTHL1 IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS | | Descriptor: | 50S ribosomal protein L1, RNA (80-MER), SULFATE ION, ... | | Authors: | Gabdulkhakov, A.G., Nevskaya, N.A., NIkonov, S.V. | | Deposit date: | 2011-10-10 | | Release date: | 2012-08-08 | | Last modified: | 2013-01-23 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | High-resolution crystal structure of the isolated ribosomal L1 stalk.
Acta Crystallogr.,Sect.D, 68, 2012
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4QG3 | | CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN G219V TTHL1 IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS | | Descriptor: | 50S ribosomal protein L1, fragment of 23S rRNA, SULFATE ION, ... | | Authors: | Gabdulkhakov, A.G., Nevskaya, N.A., Nikonov, S.V. | | Deposit date: | 2014-05-22 | | Release date: | 2015-02-11 | | Last modified: | 2015-02-25 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Protein-RNA affinity of ribosomal protein L1 mutants does not correlate with the number of intermolecular interactions.
Acta Crystallogr.,Sect.D, 71, 2015
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