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1J56
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MINIMIZED AVERAGE STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURE INCORPORATING ACTIVE SITE CONTACTS
Descriptor:BERYLLIUM TRIFLUORIDE ION, NITROGEN REGULATION PROTEIN NR(I)
Authors:Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.
Deposit date:2002-01-10
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
1KRW
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SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN
Descriptor:NITROGEN REGULATION PROTEIN NR(I)
Authors:Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.
Deposit date:2002-01-10
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
1KRX
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SOLUTION STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURES INCORPORATING ACTIVE SITE CONTACTS
Descriptor:BERYLLIUM TRIFLUORIDE ION, NITROGEN REGULATION PROTEIN NR(I)
Authors:Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.
Deposit date:2002-01-10
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
1LLS
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CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON
Descriptor:Maltose-binding periplasmic protein, XENON
Authors:Rubin, S.M., Lee, S.-Y., Ruiz, E.J., Pines, A., Wemmer, D.E.
Deposit date:2002-04-30
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:DETECTION AND CHARACTERIZATION OF XENON-BINDING SITES IN PROTEINS BY 129XE NMR SPECTROSCOPY
J.MOL.BIOL., 322, 2002
1MNL
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HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES
Descriptor:MONELLIN
Authors:Lee, S.-Y., Lee, J.-H., Chang, H.-J., Jo, J.-M., Jung, J.-W., Lee, W.
Deposit date:1998-08-06
Release date:1999-06-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculations.
Biochemistry, 38, 1999
4PB1
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STRUCTURE OF VCCNT-7C8C BOUND TO RIBAVIRIN
Descriptor:1-(beta-D-ribofuranosyl)-1H-1,2,4-triazole-3-carboxamide, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-11
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PB2
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STRUCTURE OF VCCNT-7C8C BOUND TO 5-FLUOROURIDINE
Descriptor:5-FLUOROURIDINE, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-11
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PD5
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CRYSTAL STRUCTURE OF VCCNT-7C8C BOUND TO GEMCITABINE
Descriptor:DECYL-BETA-D-MALTOPYRANOSIDE, GEMCITABINE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PD6
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CRYSTAL STRUCTURE OF VCCNT-7C8C BOUND TO URIDINE
Descriptor:DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, SODIUM ION, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PD7
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STRUCTURE OF VCCNT BOUND TO ZEBULARINE
Descriptor:DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, SODIUM ION, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.909 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PD8
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STRUCTURE OF VCCNT-7C8C BOUND TO PYRROLO-CYTIDINE
Descriptor:6-methyl-3-(beta-D-ribofuranosyl)-3,7-dihydro-2H-pyrrolo[2,3-d]pyrimidin-2-one, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PD9
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STRUCTURE OF VCCNT-7C8C BOUND TO ADENOSINE
Descriptor:ADENOSINE, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (3.096 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
4PDA
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STRUCTURE OF VCCNT-7C8C BOUND TO CYTIDINE
Descriptor:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, ...
Authors:Johnson, Z.L., Lee, S.-Y.
Deposit date:2014-04-17
Release date:2014-08-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters.
Elife, 3, 2014
3TIJ
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CRYSTAL STRUCTURE OF A CONCENTRATIVE NUCLEOSIDE TRANSPORTER FROM VIBRIO CHOLERAE
Descriptor:DECYL-BETA-D-MALTOPYRANOSIDE, NupC family protein, SODIUM ION, ...
Authors:Johnson, Z.L., Cheong, C.-G., Lee, S.-Y.
Deposit date:2011-08-20
Release date:2012-03-07
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.436 Å)
Cite:Crystal structure of a concentrative nucleoside transporter from Vibrio cholerae at 2.4A
Nature, 483, 2012
5L24
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STRUCTURE OF CNTNW N149L IN THE INTERMEDIATE 2 STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-07-31
Release date:2017-04-12
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
5L26
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STRUCTURE OF CNTNW IN AN INWARD-FACING SUBSTRATE-BOUND STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease, SODIUM ION, ...
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-07-31
Release date:2017-04-12
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
5L27
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STRUCTURE OF CNTNW N149L IN THE INTERMEDIATE 1 STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-07-31
Release date:2017-04-12
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
5L2A
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STRUCTURE OF CNTNW N149S,F366A IN AN OUTWARD-FACING STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-07-31
Release date:2017-04-12
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
5L2B
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STRUCTURE OF CNTNW N149S, E332A IN AN OUTWARD-FACING STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-07-31
Release date:2017-04-12
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
5T77
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CRYSTAL STRUCTURE OF THE MOP FLIPPASE MURJ
Descriptor:(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, ...
Authors:Kuk, A.C.Y., Lee, S.-Y.
Deposit date:2016-09-02
Release date:2016-12-28
Last modified:2017-02-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the MOP flippase MurJ in an inward-facing conformation.
Nat. Struct. Mol. Biol., 24, 2017
5U9W
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STRUCTURE OF CNTNW N149L IN THE INTERMEDIATE 3 STATE
Descriptor:2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-2-octyldecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, Nucleoside permease
Authors:Hirschi, M., Johnson, Z.L., Lee, S.-Y.
Deposit date:2016-12-18
Release date:2017-04-12
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (3.555 Å)
Cite:Visualizing multistep elevator-like transitions of a nucleoside transporter.
Nature, 545, 2017
6BPQ
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STRUCTURE OF THE COLD- AND MENTHOL-SENSING ION CHANNEL TRPM8
Descriptor:Transient receptor potential cation channel subfamily M member 8
Authors:Yin, Y., Wu, M., Zubcevic, L., Borschel, W.F., Lander, G.C., Lee, S.-Y.
Deposit date:2017-11-25
Release date:2017-12-13
Last modified:2018-01-24
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the cold- and menthol-sensing ion channel TRPM8.
Science, 359, 2018
6BW5
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HUMAN GPT (DPAGT1) IN COMPLEX WITH TUNICAMYCIN
Descriptor:(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Authors:Yoo, J., Kuk, A.C.Y., Mashalidis, E.H., Lee, S.-Y.
Deposit date:2017-12-14
Release date:2018-02-21
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
6BW6
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HUMAN GPT (DPAGT1) H129 VARIANT IN COMPLEX WITH TUNICAMYCIN
Descriptor:(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Authors:Yoo, J., Kuk, A.C.Y., Mashalidis, E.H., Lee, S.-Y.
Deposit date:2017-12-14
Release date:2018-02-21
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
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