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2PNS
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1.9 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A PLANT CYSTEINE PROTEASE ERVATAMIN-C REFINEMENT WITH CDNA DERIVED AMINO ACID SEQUENCE
Descriptor:Ervatamin-C, a papain-like plant cysteine protease, PHOSPHATE ION, ...
Authors:Ghosh, R., Guha Thakurta, P., Biswas, S., Chakrabarti, C., Dattagupta, J.K.
Deposit date:2007-04-25
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A thermostable cysteine protease precursor from a tropical plant contains an unusual C-terminal propeptide: cDNA cloning, sequence comparison and molecular modeling studies.
Biochem.Biophys.Res.Commun., 362, 2007
2PRE
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CRYSTAL STRUCTURE OF PLANT CYSTEINE PROTEASE ERVATAMIN-C COMPLEXED WITH IRREVERSIBLE INHIBITOR E-64 AT 2.7 A RESOLUTION
Descriptor:Ervatamin-C, SULFATE ION, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
Authors:Ghosh, R., Chakrabarti, C., Dattagupta, J.K., Biswas, S.
Deposit date:2007-05-04
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the substrate specificity and activity of ervatamins, the papain-like cysteine proteases from a tropical plant, Ervatamia coronaria.
Febs J., 275, 2008
3BCN
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CRYSTAL STRUCTURE OF A PAPAIN-LIKE CYSTEINE PROTEASE ERVATAMIN-A COMPLEXED WITH IRREVERSIBLE INHIBITOR E-64
Descriptor:Ervatamin-A, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, BETA-MERCAPTOETHANOL
Authors:Ghosh, R., Chakrabarti, C., Dattagupta, J.K., Biswas, S.
Deposit date:2007-11-13
Release date:2007-11-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural insights into the substrate specificity and activity of ervatamins, the papain-like cysteine proteases from a tropical plant, Ervatamia coronaria
Febs J., 275, 2008
5XZC
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CRYO-EM STRUCTURE OF P300-P53 PROTEIN COMPLEX
Descriptor:Histone acetyltransferase p300, Cellular tumor antigen p53
Authors:Ghosh, R., Roy, S., Sengupta, J.
Deposit date:2017-07-12
Release date:2019-01-23
Method:ELECTRON MICROSCOPY (10.7 Å)
Cite:(manuscript in preparation) Title: p53-mediated Allosteric Activation of p300 Autoacetylation: Implications for Specificity of Gene Regulation
To Be Published
5XZS
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CRYO-EM STRUCTURE OF P300
Descriptor:Histone acetyltransferase p300
Authors:Ghosh, R., Roy, S., Sengupta, J.
Deposit date:2017-07-13
Release date:2019-01-23
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:(manuscript in preparation) Title: p53-mediated Allosteric Activation of p300 Autoacetylation: Implications for Specificity of Gene Regulation
To be published
2I0W
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CRYSTAL STRUCTURE ANALYSIS OF NP24-I, A THAUMATIN-LIKE PROTEIN
Descriptor:Protein NP24, CHLORIDE ION
Authors:Chakrabarti, C., Ghosh, R.
Deposit date:2006-08-11
Release date:2007-07-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure analysis of NP24-I: a thaumatin-like protein
Planta, 228, 2008
1ORD
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CRYSTALLOGRAPHIC STRUCTURE OF A PLP-DEPENDENT ORNITHINE DECARBOXYLASE FROM LACTOBACILLUS 30A TO 3.1 ANGSTROMS RESOLUTION
Descriptor:ORNITHINE DECARBOXYLASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Hackert, M.L., Momany, C., Ernst, S., Ghosh, R.
Deposit date:1995-02-08
Release date:1995-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic structure of a PLP-dependent ornithine decarboxylase from Lactobacillus 30a to 3.0 A resolution.
J.Mol.Biol., 252, 1995
2HRI
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A PARALLEL STRANDED HUMAN TELOMERIC QUADRUPLEX IN COMPLEX WITH THE PORPHYRIN TMPYP4
Descriptor:5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', POTASSIUM ION, (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin
Authors:Parkinson, G.N., Ghosh, R., Neidle, S.
Deposit date:2006-07-20
Release date:2007-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural basis for binding of porphyrin to human telomeres.
Biochemistry, 46, 2007
1PHO
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CRYSTAL STRUCTURES EXPLAIN FUNCTIONAL PROPERTIES OF TWO E. COLI PORINS
Descriptor:PHOSPHOPORIN
Authors:Schirmer, T., Cowan, S.W., Jansonius, J.N.
Deposit date:1993-01-15
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures explain functional properties of two E. coli porins.
Nature, 358, 1992
3EM2
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6038
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis[(3-morpholinopropionamido)] acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-09-23
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EQW
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6042 IN SMALL UNIT CELL
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis{3-[(2R)-(2-ethylpiperidino)]propionamido}acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-01
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ERU
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6045
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis{3-[(2R)-2-methylpiperidino)]propionamido}acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-03
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ES0
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6048
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis[3-(4-methylpiperidino)propionamido]acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-03
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3ET8
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6054
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis{3-(3-[(3R)-methylpiperidino)]propionamido}acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-07
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EUI
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6042 IN A LARGE UNIT CELL
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3-[(2R)-2-ethylpiperidin-1-yl]-N-[6-({3-[(2S)-2-ethylpiperidin-1-yl]propanoyl}amino)acridin-3-yl]propanamide, ...
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-10
Release date:2008-12-02
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
3EUM
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A BIMOLECULAR ANTI-PARALLEL-STRANDED OXYTRICHA NOVA TELOMERIC QUADRUPLEX IN COMPLEX WITH A 3,6-DISUBSTITUTED ACRIDINE BSU-6066
Descriptor:5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3', POTASSIUM ION, 3,6-Bis[3-(azepan-1-yl)propionamido]acridine
Authors:Campbell, N.H., Parkinson, G., Neidle, S.
Deposit date:2008-10-10
Release date:2008-10-21
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Selectivity in Ligand Recognition of G-Quadruplex Loops.
Biochemistry, 48, 2009
5D1O
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ARCHAEAL ATP-DEPENDENT RNA LIGASE - FORM 1
Descriptor:ATP-dependent RNA ligase, ADENOSINE-5'-TRIPHOSPHATE, SULFATE ION, ...
Authors:Murakami, K.S.
Deposit date:2015-08-04
Release date:2016-03-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.648 Å)
Cite:Structural and mutational analysis of archaeal ATP-dependent RNA ligase identifies amino acids required for RNA binding and catalysis.
Nucleic Acids Res., 44, 2016
5D1P
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ARCHAEAL ATP-DEPENDENT RNA LIGASE - FORM 2
Descriptor:ATP-dependent RNA ligase, SULFATE ION, MAGNESIUM ION
Authors:Murakami, K.S.
Deposit date:2015-08-04
Release date:2016-03-09
Last modified:2016-03-30
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structural and mutational analysis of archaeal ATP-dependent RNA ligase identifies amino acids required for RNA binding and catalysis.
Nucleic Acids Res., 44, 2016
1OPF
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THE STRUCTURE OF OMPF PORIN IN A TETRAGONAL CRYSTAL FORM
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F
Authors:Cowan, S.W., Schirmer, T., Pauptit, R.A., Jansonius, J.N.
Deposit date:1994-11-21
Release date:1995-02-07
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of OmpF porin in a tetragonal crystal form.
Structure, 3, 1995
1BT9
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OMPF PORIN MUTANT D74A
Descriptor:PROTEIN (MATRIX PORIN OUTER MEMBRANE PROTEIN F)
Authors:Philippsen, A., Schirmer, T.
Deposit date:1998-09-01
Release date:1999-01-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Stability of trimeric OmpF porin: the contributions of the latching loop L2.
Biochemistry, 37, 1998
1GFM
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OMPF PORIN (MUTANT D113G)
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:Lou, K.-L., Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
1GFN
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OMPF PORIN DELETION (MUTANT DELTA 109-114)
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:Lou, K.-L., Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
1GFO
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OMPF PORIN (MUTANT R132P)
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:Lou, K.-L., Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
1GFP
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OMPF PORIN (MUTANT R42C)
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:Lou, K.-L., Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
1GFQ
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OMPF PORIN (MUTANT R82C)
Descriptor:MATRIX PORIN OUTER MEMBRANE PROTEIN F, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:Lou, K.-L., Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
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