Author results

1QGI
  • Download 1qgi
  • View 1qgi
Molmil generated image of 1qgi
CHITOSANASE FROM BACILLUS CIRCULANS
Descriptor:PROTEIN (CHITOSANASE), D-GLUCOSAMINE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Saito, J., Kita, A., Higuchi, Y., Nagata, Y., Ando, A., Miki, K.
Deposit date:1999-04-28
Release date:1999-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of chitosanase from Bacillus circulans MH-K1 at 1.6-A resolution and its substrate recognition mechanism.
J.Biol.Chem., 274, 1999
2Z6I
  • Download 2z6i
  • View 2z6i
Molmil generated image of 2z6i
CRYSTAL STRUCTURE OF S. PNEUMONIAE ENOYL-ACYL CARRIER PROTEIN REDUCTASE (FABK)
Descriptor:Trans-2-enoyl-ACP reductase II, CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Saito, J., Yamada, M., Watanabe, T., Takeuchi, Y.
Deposit date:2007-08-01
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of enoyl-acyl carrier protein reductase (FabK) from Streptococcus pneumoniae reveals the binding mode of an inhibitor.
Protein Sci., 17, 2008
2Z6J
  • Download 2z6j
  • View 2z6j
Molmil generated image of 2z6j
CRYSTAL STRUCTURE OF S. PNEUMONIAE ENOYL-ACYL CARRIER PROTEIN REDUCTASE (FABK) IN COMPLEX WITH AN INHIBITOR
Descriptor:Trans-2-enoyl-ACP reductase II, CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Saito, J., Yamada, M., Watanabe, T., Takeuchi, Y.
Deposit date:2007-08-01
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enoyl-acyl carrier protein reductase (FabK) from Streptococcus pneumoniae reveals the binding mode of an inhibitor.
Protein Sci., 17, 2008
3WXC
  • Download 3wxc
  • View 3wxc
Molmil generated image of 3wxc
CRYSTAL STRUCTURE OF IMP-1 METALLO-BETA-LACTAMASE COMPLEXED WITH A 3-AMINOPHTALIC ACID INHIBITOR
Descriptor:Beta-lactamase, ZINC ION, 3-(4-hydroxypiperidin-1-yl)benzene-1,2-dicarboxylic acid
Authors:Saito, J., Watanabe, T., Yamada, M.
Deposit date:2014-07-29
Release date:2014-10-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystallographic analysis of IMP-1 metallo-beta-lactamase complexed with a 3-aminophthalic acid derivative, structure-based drug design, and synthesis of 3,6-disubstituted phthalic acid derivative inhibitors
Bioorg.Med.Chem.Lett., 24, 2014
5HWA
  • Download 5hwa
  • View 5hwa
Molmil generated image of 5hwa
CRYSTAL STRUCTURE OF MH-K1 CHITOSANASE IN SUBSTRATE-BOUND FORM
Descriptor:Chitosanase, D-GLUCOSAMINE, CACODYLATE ION, ...
Authors:Suzuki, M., Saito, A., Ando, A., Miki, K., Saito, J.
Deposit date:2016-01-29
Release date:2017-02-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Understanding for the catalytic mechanism based on the substrate-bound structure of GH-46 chitosanase from Bacillus circulans MH-K1
to be published
2D05
  • Download 2d05
  • View 2d05
Molmil generated image of 2d05
CHITOSANASE FROM BACILLUS CIRCULANS MUTANT K218P
Descriptor:Chitosanase, SULFATE ION
Authors:Fukamizo, T., Amano, S., Yamaguchi, K., Yoshikawa, T., Katsumi, T., Saito, J., Suzuki, M., Miki, K., Nagata, Y., Ando, A.
Deposit date:2005-07-25
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding
J.Biochem.(Tokyo), 138, 2005
3AVE
  • Download 3ave
  • View 3ave
Molmil generated image of 3ave
CRYSTAL STRUCTURE OF THE FUCOSYLATED FC FRAGMENT FROM HUMAN IMMUNOGLOBULIN G1
Descriptor:Ig gamma-1 chain C region, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Matsumiya, S., Yamaguchi, Y., Saito, J., Nagano, M., Sasakawa, H., Otaki, S., Satoh, M., Shitara, K., Kato, K.
Deposit date:2011-03-04
Release date:2011-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Corrigendum to "Structural Comparison of Fucosylated and Nonfucosylated Fc Fragments of Human Immunoglobulin G1" [J. Mol. Biol. 386/3 (2007) 767-779]
J.Mol.Biol., 408, 2011
2DTS
  • Download 2dts
  • View 2dts
Molmil generated image of 2dts
CRYSTAL STRUCTURE OF THE DEFUCOSYLATED FC FRAGMENT FROM HUMAN IMMUNOGLOBULIN G1
Descriptor:Ig gamma-1 chain C region, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Matsumiya, S., Yamaguchi, Y., Saito, J., Nagano, M., Sasakawa, H., Otaki, S., Satoh, M., Shitara, K., Kato, K.
Deposit date:2006-07-14
Release date:2007-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural comparison of fucosylated and nonfucosylated fc fragments of human immunoglobulin g1
J.Mol.Biol., 368, 2007
3VOT
  • Download 3vot
  • View 3vot
Molmil generated image of 3vot
CRYSTAL STRUCTURE OF L-AMINO ACID LIGASE FROM BACILLUS LICHENIFORMIS
Descriptor:L-amino acid ligase, BL00235, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Suzuki, M., Takahashi, Y., Noguchi, A., Arai, T., Yagasaki, M., Kino, K., Saito, J.
Deposit date:2012-02-08
Release date:2012-11-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of L-amino-acid ligase from Bacillus licheniformis
Acta Crystallogr.,Sect.D, 68, 2012
5ETY
  • Download 5ety
  • View 5ety
Molmil generated image of 5ety
CRYSTAL STRUCTURE OF HUMAN TANKYRASE-1 BOUND TO K-756
Descriptor:Tankyrase-1, ZINC ION, 3-[[1-(6,7-dimethoxyquinazolin-4-yl)piperidin-4-yl]methyl]-1,4-dihydroquinazolin-2-one
Authors:Takahashi, Y., Miyagi, H., Suzuki, M., Saito, J.
Deposit date:2015-11-18
Release date:2016-06-22
Last modified:2016-07-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Discovery and Characterization of K-756, a Novel Wnt/ beta-Catenin Pathway Inhibitor Targeting Tankyrase
Mol.Cancer Ther., 15, 2016
6AD9
  • Download 6ad9
  • View 6ad9
Molmil generated image of 6ad9
CRYSTAL STRUCTURE OF PPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH DIBENZOOXEPINE DERIVATIVE COMPOUND-9
Descriptor:Peroxisome proliferator-activated receptor gamma, 12-mer peptide from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, 3-[(1E)-1-{8-[(4-methyl-2-propyl-1H-benzimidazol-1-yl)methyl]dibenzo[b,e]oxepin-11(6H)-ylidene}ethyl]-1,2,4-oxadiazol-5(4H)-one
Authors:Takahashi, Y., Suzuki, M., Yamamoto, K., Saito, J.
Deposit date:2018-07-31
Release date:2018-11-14
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Development of Dihydrodibenzooxepine Peroxisome Proliferator-Activated Receptor (PPAR) Gamma Ligands of a Novel Binding Mode as Anticancer Agents: Effective Mimicry of Chiral Structures by Olefinic E/ Z-Isomers.
J. Med. Chem., 61, 2018
2Z2L
  • Download 2z2l
  • View 2z2l
Molmil generated image of 2z2l
PENICILLIN-BINDING PROTEIN 2X (PBP2X) FROM STREPTOCOCCUS PNEUMONIAE
Descriptor:Penicillin-binding protein 2X, SULFATE ION
Authors:Yamada, M., Watanabe, T., Takeuchi, Y.
Deposit date:2007-05-23
Release date:2007-09-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure of Cefditoren Complexed with Streptococcus pneumoniae Penicillin-Binding Protein 2X: Structural Basis for its High Antimicrobial Activity
Antimicrob.Agents Chemother., 51, 2007
2Z2M
  • Download 2z2m
  • View 2z2m
Molmil generated image of 2z2m
CEFDITOREN-ACYLATED PENICILLIN-BINDING PROTEIN 2X (PBP2X) FROM STREPTOCOCCUS PNEUMONIAE
Descriptor:Penicillin-binding protein 2X, SULFATE ION, (2R)-2-[(1R)-1-{[(2Z)-2-(2-AMINO-1,3-THIAZOL-4-YL)-2-(METHOXYIMINO)ACETYL]AMINO}-2-OXOETHYL]-5-[(Z)-2-(4-METHYL-1,3-THIAZOL-5-YL)VINYL]-3,6-DIHYDRO-2H-1,3-THIAZINE-4-CARBOXYLIC ACID
Authors:Yamada, M., Watanabe, T., Takeuchi, Y.
Deposit date:2007-05-23
Release date:2007-09-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Cefditoren Complexed with Streptococcus pneumoniae Penicillin-Binding Protein 2X: Structural Basis for its High Antimicrobial Activity
Antimicrob.Agents Chemother., 51, 2007
3VMM
  • Download 3vmm
  • View 3vmm
Molmil generated image of 3vmm
CRYSTAL STRUCTURE OF BACD, AN L-AMINO ACID DIPEPTIDE LIGASE FROM BACILLUS SUBTILIS
Descriptor:Alanine-anticapsin ligase BacD, MAGNESIUM ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Shomura, Y., Higuchi, Y.
Deposit date:2011-12-14
Release date:2012-04-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and enzymatic characterization of BacD, an l-amino acid dipeptide ligase from Bacillus subtilis
Protein Sci., 2012