Author results

1DP7
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COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE
Descriptor:DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3'), MHC CLASS II TRANSCRIPTION FACTOR HRFX1, 1,2-ETHANEDIOL, ...
Authors:Gajiwala, K.S., Chen, H., Cornille, F., Roques, B.P., Reith, W., Mach, B., Burley, S.K.
Deposit date:1999-12-23
Release date:2000-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding.
Nature, 403, 2000
1WHI
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RIBOSOMAL PROTEIN L14
Descriptor:RIBOSOMAL PROTEIN L14
Authors:Davies, C., White, S.W., Ramakrishnan, V.
Deposit date:1996-01-10
Release date:1996-08-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
1TIF
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TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN
Descriptor:TRANSLATION INITIATION FACTOR 3, TRIMETHYL LEAD ION, CHLORIDE ION
Authors:Biou, V., Shu, F., Ramakrishnan, V.
Deposit date:1995-08-16
Release date:1995-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
4FXI
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CRYSTAL STRUCTURE OF THE ISOLATED E. COLI RELE TOXIN, P21 FORM
Descriptor:mRNA interferase RelE, SULFATE ION
Authors:Brodersen, D.E., Boggild, A., Sofos, N.
Deposit date:2012-07-03
Release date:2012-08-29
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (1.8003 Å)
Cite:The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
1RSS
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RIBOSOMAL PROTEIN S7 FROM THERMUS THERMOPHILUS
Descriptor:RIBOSOMAL PROTEIN S7
Authors:Wimberly, B., White, S., Ramakrishnan, V.
Deposit date:1997-08-05
Release date:1998-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids.
Structure, 5, 1997
1SEI
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STRUCTURE OF 30S RIBOSOMAL PROTEIN S8
Descriptor:RIBOSOMAL PROTEIN S8
Authors:Davies, C., Ramakrishnan, V., White, S.W.
Deposit date:1996-08-14
Release date:1997-03-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution.
Structure, 4, 1996
1CQ2
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NEUTRON STRUCTURE OF FULLY DEUTERATED SPERM WHALE MYOGLOBIN AT 2.0 ANGSTROM
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shu, F., Ramakrishnan, V., Schoenborn, B.P.
Deposit date:1999-08-04
Release date:1999-08-16
Last modified:2017-10-04
Method:NEUTRON DIFFRACTION (2 Å)
Cite:Enhanced visibility of hydrogen atoms by neutron crystallography on fully deuterated myoglobin.
Proc.Natl.Acad.Sci.USA, 97, 2000
1RL6
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RIBOSOMAL PROTEIN L6
Descriptor:PROTEIN (RIBOSOMAL PROTEIN L6)
Authors:Golden, B.L., Davies, C., Ramakrishnan, V., White, S.W.
Deposit date:1999-01-14
Release date:1999-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein.
EMBO J., 12, 1993
1TIG
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TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN
Descriptor:TRANSLATION INITIATION FACTOR 3
Authors:Biou, V., Shu, F., Ramakrishnan, V.
Deposit date:1995-08-16
Release date:1995-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
1A32
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RIBOSOMAL PROTEIN S15 FROM BACILLUS STEAROTHERMOPHILUS
Descriptor:RIBOSOMAL PROTEIN S15
Authors:Clemons Junior, W.M., Davies, C., White, S.W., Ramakrishnan, V.
Deposit date:1998-01-27
Release date:1998-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational variability of the N-terminal helix in the structure of ribosomal protein S15.
Structure, 6, 1998
1QB2
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CRYSTAL STRUCTURE OF THE CONSERVED SUBDOMAIN OF HUMAN PROTEIN SRP54M AT 2.1A RESOLUTION: EVIDENCE FOR THE MECHANISM OF SIGNAL PEPTIDE BINDING
Descriptor:HUMAN SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN
Authors:Clemons Jr., W.M., Gowda, K., Black, S.D., Zwieb, C., Ramakrishnan, V.
Deposit date:1999-04-29
Release date:1999-10-20
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the conserved subdomain of human protein SRP54M at 2.1 A resolution: evidence for the mechanism of signal peptide binding.
J.Mol.Biol., 292, 1999
1KA2
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STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE APO-MG
Descriptor:M32 carboxypeptidase, MAGNESIUM ION
Authors:Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1OJ5
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CRYSTAL STRUCTURE OF THE NCO-A1 PAS-B DOMAIN BOUND TO THE STAT6 TRANSACTIVATION DOMAIN LXXLL MOTIF
Descriptor:STEROID RECEPTOR COACTIVATOR 1A, SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6, IODIDE ION
Authors:Razeto, A., Ramakrishnan, V., Giller, K., Lakomek, N., Carlomagno, T., Griesinger, C., Lodrini, M., Litterst, C.M., Pftizner, E., Becker, S.
Deposit date:2003-07-02
Release date:2004-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of the Ncoa-1/Src-1 Pas-B Domain Bound to the Lxxll Motif of the Stat6 Transactivation Domain
J.Mol.Biol., 336, 2004
1BOB
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HISTONE ACETYLTRANSFERASE HAT1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A
Descriptor:HISTONE ACETYLTRANSFERASE, CALCIUM ION, ACETYL COENZYME *A
Authors:Dutnall, R.N., Tafrov, S.T., Sternglanz, R., Ramakrishnan, V.
Deposit date:1998-07-02
Release date:1999-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the histone acetyltransferase Hat1: a paradigm for the GCN5-related N-acetyltransferase superfamily.
Cell(Cambridge,Mass.), 94, 1998
1K9X
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STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE APO-YB
Descriptor:M32 carboxypeptidase
Authors:Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1QSM
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HISTONE ACETYLTRANSFERASE HPA2 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A
Descriptor:HPA2 HISTONE ACETYLTRANSFERASE, ACETYL COENZYME *A
Authors:Angus-Hill, M.L., Dutnall, R.N., Tafrov, S.T., Sternglanz, R., Ramakrishnan, V.
Deposit date:1999-06-22
Release date:1999-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.
J.Mol.Biol., 294, 1999
2VQE
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MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Kurata, S., Weixlbaumer, A., Ohtsuki, T., Shimazaki, T., Wada, T., Kirino, Y., Takai, K., Watanabe, K., Ramakrishnan, V., Suzuki, T.
Deposit date:2008-03-13
Release date:2008-04-29
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
J.Biol.Chem., 283, 2008
5NWX
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INSIGHT INTO THE MOLECULAR RECOGNITION MECHANISM OF THE COACTIVATOR NCOA1 BY STAT6
Descriptor:Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L., Giller, K., Pfitzner, E., Griesinger, C., Becker, S.
Deposit date:2017-05-08
Release date:2017-12-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
1MMS
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CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX
Descriptor:23S RIBOSOMAL RNA, PROTEIN (RIBOSOMAL PROTEIN L11), CADMIUM ION, ...
Authors:Wimberly, B.T., Guymon, R., Mccutcheon, J.P., White, S.W., Ramakrishnan, V.
Deposit date:1999-04-14
Release date:2000-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A detailed view of a ribosomal active site: the structure of the L11-RNA complex.
Cell(Cambridge,Mass.), 97, 1999
1DIV
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RIBOSOMAL PROTEIN L9
Descriptor:RIBOSOMAL PROTEIN L9
Authors:Hoffman, D.W., Cameron, C., Davies, C., Gerchman, S.E., Kycia, J.H., Porter, S., Ramakrishnan, V., White, S.W.
Deposit date:1996-07-02
Release date:1997-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein.
EMBO J., 13, 1994
1HST
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CRYSTAL STRUCTURE OF GLOBULAR DOMAIN OF HISTONE H5 AND ITS IMPLICATIONS FOR NUCLEOSOME BINDING
Descriptor:HISTONE H5
Authors:Ramakrishnan, V., Finch, J.T., Graziano, V., Lee, P.L., Sweet, R.M.
Deposit date:1993-03-30
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of globular domain of histone H5 and its implications for nucleosome binding.
Nature, 362, 1993
1PKP
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THE STRUCTURE OF RIBOSOMAL PROTEIN S5 REVEALS SITES OF INTERACTION WITH 16S RRNA
Descriptor:RIBOSOMAL PROTEIN S5
Authors:Ramakrishnan, V., White, S.W.
Deposit date:1993-08-30
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA.
Nature, 358, 1992
2UUB
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
Descriptor:16S Ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Weixlbaumer, A., Murphy, F.V., Dziergowska, A., Malkiewicz, A., Vendeix, F.A.P., Agris, P.F., Ramakrishnan, V.
Deposit date:2007-03-01
Release date:2007-05-15
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism for Expanding the Decoding Capacity of Transfer Rnas by Modification of Uridines
Nat.Struct.Mol.Biol., 14, 2007
4V51
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STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME COMPLEXED WITH MRNA, TRNA AND PAROMOMYCIN
Descriptor:16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Selmer, M., Dunham, C.M., Murphy, F.V., Weixlbaumer, A., Petry, S., Weir, J.R., Kelley, A.C., Ramakrishnan, V.
Deposit date:2006-07-31
Release date:2014-07-09
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the 70S ribosome complexed with mRNA and tRNA.
Science, 313, 2006
4V9H
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CRYSTAL STRUCTURE OF THE RIBOSOME BOUND TO ELONGATION FACTOR G IN THE GUANOSINE TRIPHOSPHATASE STATE
Descriptor:16S ribosomal RNA, PE hybrid state tRNA Phe, mRNA, ...
Authors:Tourigny, D.S., Fernandez, I.S., Kelley, A.C., Ramakrishnan, V.
Deposit date:2013-03-25
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.857 Å)
Cite:Elongation factor G bound to the ribosome in an intermediate state of translocation.
Science, 340, 2013
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