1DP7 | | COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE | | Descriptor: | DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3'), MHC CLASS II TRANSCRIPTION FACTOR HRFX1, 1,2-ETHANEDIOL, ... | | Authors: | Gajiwala, K.S., Chen, H., Cornille, F., Roques, B.P., Reith, W., Mach, B., Burley, S.K. | | Deposit date: | 1999-12-23 | | Release date: | 2000-03-06 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding.
Nature, 403, 2000
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1WHI | | RIBOSOMAL PROTEIN L14 | | Descriptor: | RIBOSOMAL PROTEIN L14 | | Authors: | Davies, C., White, S.W., Ramakrishnan, V. | | Deposit date: | 1996-01-10 | | Release date: | 1996-08-17 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
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1TIF | | TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN | | Descriptor: | TRANSLATION INITIATION FACTOR 3, TRIMETHYL LEAD ION, CHLORIDE ION | | Authors: | Biou, V., Shu, F., Ramakrishnan, V. | | Deposit date: | 1995-08-16 | | Release date: | 1995-12-07 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
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4FXI | |
1RSS | |
1SEI | | STRUCTURE OF 30S RIBOSOMAL PROTEIN S8 | | Descriptor: | RIBOSOMAL PROTEIN S8 | | Authors: | Davies, C., Ramakrishnan, V., White, S.W. | | Deposit date: | 1996-08-14 | | Release date: | 1997-03-12 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution.
Structure, 4, 1996
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1CQ2 | |
1RL6 | | RIBOSOMAL PROTEIN L6 | | Descriptor: | PROTEIN (RIBOSOMAL PROTEIN L6) | | Authors: | Golden, B.L., Davies, C., Ramakrishnan, V., White, S.W. | | Deposit date: | 1999-01-14 | | Release date: | 1999-02-02 | | Last modified: | 2019-10-30 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein.
EMBO J., 12, 1993
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1TIG | |
1A32 | |
1QB2 | | CRYSTAL STRUCTURE OF THE CONSERVED SUBDOMAIN OF HUMAN PROTEIN SRP54M AT 2.1A RESOLUTION: EVIDENCE FOR THE MECHANISM OF SIGNAL PEPTIDE BINDING | | Descriptor: | HUMAN SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN | | Authors: | Clemons Jr., W.M., Gowda, K., Black, S.D., Zwieb, C., Ramakrishnan, V. | | Deposit date: | 1999-04-29 | | Release date: | 1999-10-20 | | Last modified: | 2017-10-04 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Crystal structure of the conserved subdomain of human protein SRP54M at 2.1 A resolution: evidence for the mechanism of signal peptide binding.
J.Mol.Biol., 292, 1999
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1KA2 | | STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE APO-MG | | Descriptor: | M32 carboxypeptidase, MAGNESIUM ION | | Authors: | Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K. | | Deposit date: | 2001-10-31 | | Release date: | 2002-11-06 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
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1OJ5 | | CRYSTAL STRUCTURE OF THE NCO-A1 PAS-B DOMAIN BOUND TO THE STAT6 TRANSACTIVATION DOMAIN LXXLL MOTIF | | Descriptor: | STEROID RECEPTOR COACTIVATOR 1A, SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6, IODIDE ION | | Authors: | Razeto, A., Ramakrishnan, V., Giller, K., Lakomek, N., Carlomagno, T., Griesinger, C., Lodrini, M., Litterst, C.M., Pftizner, E., Becker, S. | | Deposit date: | 2003-07-02 | | Release date: | 2004-02-12 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.21 Å) | | Cite: | Structure of the Ncoa-1/Src-1 Pas-B Domain Bound to the Lxxll Motif of the Stat6 Transactivation Domain
J.Mol.Biol., 336, 2004
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1BOB | | HISTONE ACETYLTRANSFERASE HAT1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A | | Descriptor: | HISTONE ACETYLTRANSFERASE, CALCIUM ION, ACETYL COENZYME *A | | Authors: | Dutnall, R.N., Tafrov, S.T., Sternglanz, R., Ramakrishnan, V. | | Deposit date: | 1998-07-02 | | Release date: | 1999-04-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structure of the histone acetyltransferase Hat1: a paradigm for the GCN5-related N-acetyltransferase superfamily.
Cell(Cambridge,Mass.), 94, 1998
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1K9X | | STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE APO-YB | | Descriptor: | M32 carboxypeptidase | | Authors: | Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K. | | Deposit date: | 2001-10-31 | | Release date: | 2002-11-06 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
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1QSM | | HISTONE ACETYLTRANSFERASE HPA2 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A | | Descriptor: | HPA2 HISTONE ACETYLTRANSFERASE, ACETYL COENZYME *A | | Authors: | Angus-Hill, M.L., Dutnall, R.N., Tafrov, S.T., Sternglanz, R., Ramakrishnan, V. | | Deposit date: | 1999-06-22 | | Release date: | 1999-12-22 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.
J.Mol.Biol., 294, 1999
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2VQE | | MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Kurata, S., Weixlbaumer, A., Ohtsuki, T., Shimazaki, T., Wada, T., Kirino, Y., Takai, K., Watanabe, K., Ramakrishnan, V., Suzuki, T. | | Deposit date: | 2008-03-13 | | Release date: | 2008-04-29 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
J.Biol.Chem., 283, 2008
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5NWX | | INSIGHT INTO THE MOLECULAR RECOGNITION MECHANISM OF THE COACTIVATOR NCOA1 BY STAT6 | | Descriptor: | Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6 | | Authors: | Russo, L., Giller, K., Pfitzner, E., Griesinger, C., Becker, S. | | Deposit date: | 2017-05-08 | | Release date: | 2017-12-13 | | Method: | X-RAY DIFFRACTION (2.51 Å) | | Cite: | Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
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1MMS | | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX | | Descriptor: | 23S RIBOSOMAL RNA, PROTEIN (RIBOSOMAL PROTEIN L11), CADMIUM ION, ... | | Authors: | Wimberly, B.T., Guymon, R., Mccutcheon, J.P., White, S.W., Ramakrishnan, V. | | Deposit date: | 1999-04-14 | | Release date: | 2000-04-17 | | Last modified: | 2019-11-27 | | Method: | X-RAY DIFFRACTION (2.57 Å) | | Cite: | A detailed view of a ribosomal active site: the structure of the L11-RNA complex.
Cell(Cambridge,Mass.), 97, 1999
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1DIV | | RIBOSOMAL PROTEIN L9 | | Descriptor: | RIBOSOMAL PROTEIN L9 | | Authors: | Hoffman, D.W., Cameron, C., Davies, C., Gerchman, S.E., Kycia, J.H., Porter, S., Ramakrishnan, V., White, S.W. | | Deposit date: | 1996-07-02 | | Release date: | 1997-01-11 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein.
EMBO J., 13, 1994
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1HST | | CRYSTAL STRUCTURE OF GLOBULAR DOMAIN OF HISTONE H5 AND ITS IMPLICATIONS FOR NUCLEOSOME BINDING | | Descriptor: | HISTONE H5 | | Authors: | Ramakrishnan, V., Finch, J.T., Graziano, V., Lee, P.L., Sweet, R.M. | | Deposit date: | 1993-03-30 | | Release date: | 1993-10-31 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Crystal structure of globular domain of histone H5 and its implications for nucleosome binding.
Nature, 362, 1993
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1PKP | |
2UUB | | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN. | | Descriptor: | 16S Ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Weixlbaumer, A., Murphy, F.V., Dziergowska, A., Malkiewicz, A., Vendeix, F.A.P., Agris, P.F., Ramakrishnan, V. | | Deposit date: | 2007-03-01 | | Release date: | 2007-05-15 | | Last modified: | 2018-04-04 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Mechanism for Expanding the Decoding Capacity of Transfer Rnas by Modification of Uridines
Nat.Struct.Mol.Biol., 14, 2007
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4V51 | | STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME COMPLEXED WITH MRNA, TRNA AND PAROMOMYCIN | | Descriptor: | 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Selmer, M., Dunham, C.M., Murphy, F.V., Weixlbaumer, A., Petry, S., Weir, J.R., Kelley, A.C., Ramakrishnan, V. | | Deposit date: | 2006-07-31 | | Release date: | 2014-07-09 | | Last modified: | 2019-01-23 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Structure of the 70S ribosome complexed with mRNA and tRNA.
Science, 313, 2006
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6SGC | | RABBIT 80S RIBOSOME STALLED ON A POLY(A) TAIL | | Descriptor: | 18S ribosomal RNA, uS2, 40S ribosomal protein S3a, ... | | Authors: | Chandrasekaran, V., Juszkiewicz, S., Choi, J., Puglisi, J.D., Brown, A., Shao, S., Ramakrishnan, V., Hegde, R.S. | | Deposit date: | 2019-08-03 | | Release date: | 2019-12-04 | | Last modified: | 2019-12-18 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Mechanism of ribosome stalling during translation of a poly(A) tail.
Nat.Struct.Mol.Biol., 26, 2019
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