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4WT8
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BU of 4wt8 by Molmil
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
Descriptor: 23S rRNA (2899-MER), 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Amunts, A, Fiedorczuk, K, Ramakrishnan, V.
Deposit date:2014-10-29
Release date:2015-01-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics.
J.Mol.Biol., 427, 2015
2O01
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BU of 2o01 by Molmil
The Structure of a plant photosystem I supercomplex at 3.4 Angstrom resolution
Descriptor: AT3g54890, BETA-CAROTENE, CHLOROPHYLL A, ...
Authors:Amunts, A, Drory, O, Nelson, N.
Deposit date:2006-11-27
Release date:2007-05-08
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The structure of a plant photosystem I supercomplex at 3.4 A resolution.
Nature, 447, 2007
3J6B
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BU of 3j6b by Molmil
Structure of the yeast mitochondrial large ribosomal subunit
Descriptor: 21S ribosomal RNA, 54S ribosomal protein IMG1, mitochondrial, ...
Authors:Amunts, A, Brown, A, Bai, X.C, Llacer, J.L, Hussain, T, Emsley, P, Long, F, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V.
Deposit date:2014-01-22
Release date:2014-04-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the yeast mitochondrial large ribosomal subunit.
Science, 343, 2014
3J9M
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BU of 3j9m by Molmil
Structure of the human mitochondrial ribosome (class 1)
Descriptor: 12S rRNA, 16S rRNA, E-site tRNA, ...
Authors:Amunts, A, Brown, A, Toots, J, Scheres, S.H, Ramakrishnan, V.
Deposit date:2015-02-08
Release date:2015-04-15
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ribosome. The structure of the human mitochondrial ribosome.
Science, 348, 2015
2WSF
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BU of 2wsf by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-05
Release date:2009-11-17
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structure determination and improved model of plant photosystem I.
J. Biol. Chem., 285, 2010
2WSC
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BU of 2wsc by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-04
Release date:2009-11-17
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure Determination and Improved Model of Plant Photosystem I.
J.Biol.Chem., 285, 2010
2WSE
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BU of 2wse by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-05
Release date:2009-11-17
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure determination and improved model of plant photosystem I
J. Biol. Chem., 285, 2010
6YWS
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BU of 6yws by Molmil
The structure of the large subunit of the mitoribosome from Neurospora crassa
Descriptor: 50S ribosomal protein L14, 50S ribosomal protein L17, 50S ribosomal protein L24, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWY
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BU of 6ywy by Molmil
The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWX
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BU of 6ywx by Molmil
The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWE
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BU of 6ywe by Molmil
The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YW5
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BU of 6yw5 by Molmil
The structure of the small subunit of the mitoribosome from Neurospora crassa
Descriptor: 16S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWV
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BU of 6ywv by Molmil
The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa
Descriptor: 23 S rRNA, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
3J7Y
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BU of 3j7y by Molmil
Structure of the large ribosomal subunit from human mitochondria
Descriptor: 16S rRNA, ADENOSINE MONOPHOSPHATE, CRIF1, ...
Authors:Brown, A, Amunts, A, Bai, X.C, Sugimoto, Y, Edwards, P.C, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V.
Deposit date:2014-08-26
Release date:2014-10-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the large ribosomal subunit from human mitochondria.
Science, 346, 2014
8ANY
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BU of 8any by Molmil
Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
Descriptor: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
Authors:Singh, V, Itoh, Y, Amunts, A.
Deposit date:2022-08-06
Release date:2023-08-16
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis of LRPPRC-SLIRP-dependent translation by the mitoribosome.
Nat.Struct.Mol.Biol., 2024
8APO
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BU of 8apo by Molmil
Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites
Descriptor: A-site tRNA anticodon loop, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Tobiasson, V, Berzina, I, Amunts, A.
Deposit date:2022-08-10
Release date:2023-06-21
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Nat Commun, 13, 2022
9HCF
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BU of 9hcf by Molmil
Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, GTPBP7, GTPBP10 and the MALSU-L0R8F8-mtACP complex with uL16m, State B2 (SAMC knock-out)
Descriptor: 16S rRNA (1432-MER), 5-cytosine rRNA methyltransferase NSUN4, Acyl carrier protein, ...
Authors:Singh, V, Rorbach, J, Freyer, C, Amunts, A, Wredenberg, A.
Deposit date:2024-11-08
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:The mitochondrial methylation potential gates mitoribosome assembly.
Nat Commun, 16, 2025
7OG4
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BU of 7og4 by Molmil
Human mitochondrial ribosome in complex with P/E-tRNA
Descriptor: 12S mitochondrial rRNA, 16S mitochondrial rRNA, 28S ribosomal protein S10, ...
Authors:Aibara, S, Singh, V, Modelska, A, Amunts, A.
Deposit date:2021-05-06
Release date:2021-06-23
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of mitochondrial translation.
Elife, 9, 2020
5MRF
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BU of 5mrf by Molmil
Structure of the yeast mitochondrial ribosome - Class C
Descriptor: 15S ribosomal RNA, 21S ribosomal RNA, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Desai, N, Brown, A, Amunts, A, Ramakrishnan, V.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.97 Å)
Cite:The structure of the yeast mitochondrial ribosome.
Science, 355, 2017
6ERI
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BU of 6eri by Molmil
Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10 alpha, ...
Authors:Perez Borema, A, Aibara, S, Paul, B, Tobiasson, V, Kimanius, D, Forsberg, B.O, Wallden, K, Lindahl, E, Amunts, A.
Deposit date:2017-10-18
Release date:2018-04-18
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor.
Nat Plants, 4, 2018
8B6F
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BU of 8b6f by Molmil
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6H
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BU of 8b6h by Molmil
Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6G
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BU of 8b6g by Molmil
Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
Authors:Muhleip, A, Kock Flygaard, R, Baradaran, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6J
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BU of 8b6j by Molmil
Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Apocytochrome b, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8OM2
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BU of 8om2 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024

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PDB entries from 2025-07-09

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