Author results

2GCC
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SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Descriptor:ATERF1
Authors:Allen, M.D., Yamasaki, K., Ohme-Takagi, M., Tateno, M., Suzuki, M.
Deposit date:1998-03-13
Release date:1999-03-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.
EMBO J., 17, 1998
2Z5P
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APO-FR WITH LOW CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z5Q
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APO-FR WITH INTERMEDIATE CONTENT OF PD ION
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z5R
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APO-FR WITH HIGH CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
3ASX
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HUMAN SQUALENE SYNTHASE IN COMPLEX WITH 1-{4-[{4-CHLORO-2-[(2-CHLOROPHENYL)(HYDROXY)METHYL]PHENYL}(2,2-DIMETHYLPROPYL)AMINO]-4-OXOBUTANOYL}PIPERIDINE-3-CARBOXYLIC ACID
Descriptor:Squalene synthase, PHOSPHATE ION, (3R)-1-{4-[{4-chloro-2-[(S)-(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid
Authors:Shimizu, H., Suzuki, M., Katakura, S., Yamazaki, K., Higashihashi, N., Ichikawa, M., Yokomizo, A., Itoh, M., Sugita, K., Usui, H.
Deposit date:2010-12-22
Release date:2011-12-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors
Bioorg.Med.Chem., 19, 2011
3FI6
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APO-H49AFR WITH HIGH CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Abe, M., Ueno, T., Hirata, K., Suzuki, M., Abe, S., Shimizu, N., Yamaoto, M., Takata, M., Watanabe, Y.
Deposit date:2008-12-11
Release date:2009-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Process of Accumulation of Metal Ions on the Interior Surface of apo-Ferritin: Crystal Structures of a Series of apo-Ferritins Containing Variable Quantities of Pd(II) Ions
J.Am.Chem.Soc., 131, 2009
3GCC
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SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, 46 STRUCTURES
Descriptor:ATERF1
Authors:Allen, M.D., Yamasaki, K., Ohme-Takagi, M., Tateno, M., Suzuki, M.
Deposit date:1998-03-13
Release date:1999-03-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.
EMBO J., 17, 1998
3KLR
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BOVINE H-PROTEIN AT 0.88 ANGSTROM RESOLUTION
Descriptor:Glycine cleavage system H protein, SULFATE ION, GLYCEROL
Authors:Higashiura, A., Kurakane, T., Matsuda, M., Suzuki, M., Inaka, K., Sato, M., Tanaka, H., Fujiwara, K., Nakagawa, A.
Deposit date:2009-11-09
Release date:2010-06-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
3VWU
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CRYSTAL STRUCTURE OF PEROXIREDOXIN 4 FROM M. MUSCULUS
Descriptor:Peroxiredoxin-4
Authors:Inaba, K., Suzuki, M.
Deposit date:2012-09-03
Release date:2013-09-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3VWV
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CRYSTAL STRUCTURE OF N-TERMINALLY TRUNCATED PEROXIREDOXIN 4 FROM M. MUSCULUS
Descriptor:Peroxiredoxin-4, PENTAETHYLENE GLYCOL, ACETIC ACID
Authors:Inaba, K., Suzuki, M.
Deposit date:2012-09-03
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3WUL
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WUM
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXQ
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SERIAL FEMTOSECOND X-RAY STRUCTURE OF HUMAN FATTY ACID-BINDING PROTEIN TYPE-3 (FABP3) IN COMPLEX WITH STEARIC ACID (C18:0) DETERMINED USING X-RAY FREE-ELECTRON LASER AT SACLA
Descriptor:Fatty acid-binding protein, heart, STEARIC ACID
Authors:Mizohata, E., Suzuki, M., Kakinouchi, K., Sugiyama, S., Murata, M., Sugahara, M., Nango, E., Tanaka, T., Tanaka, R., Tono, K., Song, C., Hatsui, T., Joti, Y., Yabashi, M., Iwata, S.
Deposit date:2014-08-04
Release date:2014-11-05
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
3WXS
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THAUMATIN STRUCTURE DETERMINED BY SPRING-8 ANGSTROM COMPACT FREE ELECTRON LASER (SACLA)
Descriptor:thaumatin I, L(+)-TARTARIC ACID
Authors:Masuda, T., Nango, E., Sugahara, M., Mizohata, E., Tanaka, T., Tanaka, R., Suzuki, M., Mikami, B., Iwata, S.
Deposit date:2014-08-07
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
3WXT
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXU
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
4W4Q
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GLUCOSE ISOMERASE STRUCTURE DETERMINED BY SERIAL FEMTOSECOND CRYSTALLOGRAPHY AT SACLA
Descriptor:Xylose isomerase, CALCIUM ION
Authors:Nango, E., Tanaka, T., Sugahara, M., Suzuki, M., Iwata, S.
Deposit date:2014-08-15
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
4YSA
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COMPLETELY OXIDIZED STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS
Descriptor:Nitrite reductase, COPPER (II) ION, SODIUM ION
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
4YSC
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COMPLETELY OXIDIZED STRUCTURE OF COPPER NITRITE REDUCTASE FROM ALCALIGENES FAECALIS
Descriptor:Copper-containing nitrite reductase, COPPER (II) ION, CHLORIDE ION
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-03-09
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016
4YSD
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ROOM TEMPERATURE STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS
Descriptor:Nitrite reductase, COPPER (II) ION, ACETIC ACID
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
4YSE
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HIGH RESOLUTION SYNCHROTRON STRUCTURE OF COPPER NITRITE REDUCTASE FROM ALCALIGENES FAECALIS
Descriptor:Copper-containing nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-03-09
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016
4YSO
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COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS - 0.064 MGY
Descriptor:Nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
4YSP
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STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS - 8.32 MGY
Descriptor:Nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diedrichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
4YSQ
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STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS - 8.38 MGY
Descriptor:Nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
4YSR
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STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS - 16.6 MGY
Descriptor:Nitrite reductase, COPPER (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016