Author results

1KA2
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STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE APO-MG
Descriptor:M32 carboxypeptidase, MAGNESIUM ION
Authors:Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1KA4
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STRUCTURE OF PYROCOCCUS FURIOSUS CARBOXYPEPTIDASE NAT-PB
Descriptor:M32 carboxypeptidase, LEAD (II) ION
Authors:Arndt, J.W., Hao, B., Ramakrishnan, V., Cheng, T., Chan, S.I., Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1MMS
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CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX
Descriptor:23S RIBOSOMAL RNA, PROTEIN (RIBOSOMAL PROTEIN L11), CADMIUM ION, ...
Authors:Wimberly, B.T., Guymon, R., Mccutcheon, J.P., White, S.W., Ramakrishnan, V.
Deposit date:1999-04-14
Release date:2000-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A detailed view of a ribosomal active site: the structure of the L11-RNA complex.
Cell(Cambridge,Mass.), 97, 1999
1N32
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
Descriptor:16S RIBOSOMAL RNA, ANTICODON STEM-LOOP OF LEU-2 TRANSFER RNA, A-SITE MESSENGER RNA FRAGMENT, ...
Authors:Ogle, J.M., Murphy IV, F.V., Tarry, M.J., Ramakrishnan, V.
Deposit date:2002-10-25
Release date:2002-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form
Cell(Cambridge,Mass.), 111, 2002
1N33
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
Descriptor:16S RIBOSOMAL RNA, ANTICODON STEM-LOOP OF SER TRANSFER RNA, A-SITE MESSENGER RNA FRAGMENT, ...
Authors:Ogle, J.M., Murphy IV, F.V., Tarry, M.J., Ramakrishnan, V.
Deposit date:2002-10-25
Release date:2002-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form
Cell(Cambridge,Mass.), 111, 2002
1N34
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
Descriptor:16S RIBOSOMAL RNA, A-SITE MESSENGER RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S2, ...
Authors:Ogle, J.M., Murphy IV, F.V., Tarry, M.J., Ramakrishnan, V.
Deposit date:2002-10-25
Release date:2002-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form
Cell(Cambridge,Mass.), 111, 2002
1N36
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STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
Descriptor:16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Ogle, J.M., Murphy IV, F.V., Tarry, M.J., Ramakrishnan, V.
Deposit date:2002-10-25
Release date:2002-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form
Cell(Cambridge,Mass.), 111, 2002
1OJ5
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CRYSTAL STRUCTURE OF THE NCO-A1 PAS-B DOMAIN BOUND TO THE STAT6 TRANSACTIVATION DOMAIN LXXLL MOTIF
Descriptor:STEROID RECEPTOR COACTIVATOR 1A, SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6, IODIDE ION
Authors:Razeto, A., Ramakrishnan, V., Giller, K., Lakomek, N., Carlomagno, T., Griesinger, C., Lodrini, M., Litterst, C.M., Pftizner, E., Becker, S.
Deposit date:2003-07-02
Release date:2004-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of the Ncoa-1/Src-1 Pas-B Domain Bound to the Lxxll Motif of the Stat6 Transactivation Domain
J.Mol.Biol., 336, 2004
1OLN
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MODEL FOR THIOSTREPTON ANTIBIOTIC BINDING TO L11 SUBSTRATE FROM 50S RIBOSOMAL RNA
Descriptor:50S RIBOSOMAL PROTEIN L11, THIOSTREPTON, RNA
Authors:Lentzen, G., Klinck, R., Matassova, N., Aboul-Ela, F., Murchie, A.I.H.
Deposit date:2003-08-08
Release date:2003-09-11
Last modified:2017-11-15
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Structural Basis for Contrasting Activities of Ribosome Binding Thiazole Antibiotics
Chem.Biol., 10, 2003
1PKP
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THE STRUCTURE OF RIBOSOMAL PROTEIN S5 REVEALS SITES OF INTERACTION WITH 16S RRNA
Descriptor:RIBOSOMAL PROTEIN S5
Authors:Ramakrishnan, V., White, S.W.
Deposit date:1993-08-30
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA.
Nature, 358, 1992
1QB2
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CRYSTAL STRUCTURE OF THE CONSERVED SUBDOMAIN OF HUMAN PROTEIN SRP54M AT 2.1A RESOLUTION: EVIDENCE FOR THE MECHANISM OF SIGNAL PEPTIDE BINDING
Descriptor:HUMAN SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN
Authors:Clemons Jr., W.M., Gowda, K., Black, S.D., Zwieb, C., Ramakrishnan, V.
Deposit date:1999-04-29
Release date:1999-10-20
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the conserved subdomain of human protein SRP54M at 2.1 A resolution: evidence for the mechanism of signal peptide binding.
J.Mol.Biol., 292, 1999
1QD7
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PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
Descriptor:CENTRAL FRAGMENT OF 16 S RNA, END FRAGMENT OF 16 S RNA, S4 RIBOSOMAL PROTEIN, ...
Authors:Clemons Jr., W.M., May, J.L.C., Wimberly, B.T., McCutcheon, J.P., Capel, M.S., Ramakrishnan, V.
Deposit date:1999-07-09
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
Nature, 400, 1999
1QSM
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HISTONE ACETYLTRANSFERASE HPA2 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A
Descriptor:HPA2 HISTONE ACETYLTRANSFERASE, ACETYL COENZYME *A
Authors:Angus-Hill, M.L., Dutnall, R.N., Tafrov, S.T., Sternglanz, R., Ramakrishnan, V.
Deposit date:1999-06-22
Release date:1999-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.
J.Mol.Biol., 294, 1999
1QSO
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HISTONE ACETYLTRANSFERASE HPA2 FROM SACCHAROMYCES CEREVISIAE
Descriptor:HPA2 HISTONE ACETYLTRANSFERASE
Authors:Angus-Hill, M.L., Dutnall, R.N., Tafrov, S.T., Sterngalnz, R., Ramakrishnan, V.
Deposit date:1999-06-22
Release date:1999-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.
J.Mol.Biol., 294, 1999
1RIP
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RIBOSOMAL PROTEIN S17: CHARACTERIZATION OF THE THREE-DIMENSIONAL STRUCTURE BY 1H-AND 15N-NMR
Descriptor:RIBOSOMAL PROTEIN S17
Authors:Golden, B.L., Hoffman, D.W., Ramakrishnan, V., White, S.W.
Deposit date:1993-08-17
Release date:1993-10-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Ribosomal protein S17: characterization of the three-dimensional structure by 1H and 15N NMR.
Biochemistry, 32, 1993
1RL6
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RIBOSOMAL PROTEIN L6
Descriptor:PROTEIN (RIBOSOMAL PROTEIN L6)
Authors:Golden, B.L., Davies, C., Ramakrishnan, V., White, S.W.
Deposit date:1999-01-14
Release date:1999-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein.
EMBO J., 12, 1993
1RSS
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RIBOSOMAL PROTEIN S7 FROM THERMUS THERMOPHILUS
Descriptor:RIBOSOMAL PROTEIN S7
Authors:Wimberly, B., White, S., Ramakrishnan, V.
Deposit date:1997-08-05
Release date:1998-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids.
Structure, 5, 1997
1SEI
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STRUCTURE OF 30S RIBOSOMAL PROTEIN S8
Descriptor:RIBOSOMAL PROTEIN S8
Authors:Davies, C., Ramakrishnan, V., White, S.W.
Deposit date:1996-08-14
Release date:1997-03-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution.
Structure, 4, 1996
1T1M
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BINDING POSITION OF RIBOSOME RECYCLING FACTOR (RRF) ON THE E. COLI 70S RIBOSOME
Descriptor:dodecamer fragment of double helix from 23S rRNA, 42-mer fragment of double helix from 16S rRNA, ribosome recycling factor
Authors:Agrawal, R.K., Sharma, M.R., Kiel, M.C., Hirokawa, G., Booth, T.M., Spahn, C.M., Grassucci, R.A., Kaji, A., Frank, J.
Deposit date:2004-04-16
Release date:2004-06-15
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
1T1O
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COMPONENTS OF THE CONTROL 70S RIBOSOME TO PROVIDE REFERENCE FOR THE RRF BINDING SITE
Descriptor:dodecamer fragment of double helix from 23S rRNA, 19-mer fragment of the 23S rRNA, 42-mer fragment of double helix from 16S rRNA
Authors:Agrawal, R.K., Sharma, M.R., Kiel, M.C., Hirokawa, G., Booth, T.M., Spahn, C.M., Grassucci, R.A., Kaji, A., Frank, J.
Deposit date:2004-04-16
Release date:2004-06-15
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: Functional implications
Proc.Natl.Acad.Sci.USA, 101, 2004
1TIF
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TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN
Descriptor:TRANSLATION INITIATION FACTOR 3, TRIMETHYL LEAD ION, CHLORIDE ION
Authors:Biou, V., Shu, F., Ramakrishnan, V.
Deposit date:1995-08-16
Release date:1995-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
1TIG
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TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN
Descriptor:TRANSLATION INITIATION FACTOR 3
Authors:Biou, V., Shu, F., Ramakrishnan, V.
Deposit date:1995-08-16
Release date:1995-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J., 14, 1995
1WHI
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RIBOSOMAL PROTEIN L14
Descriptor:RIBOSOMAL PROTEIN L14
Authors:Davies, C., White, S.W., Ramakrishnan, V.
Deposit date:1996-01-10
Release date:1996-08-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
1X18
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CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT
Descriptor:5'-R(P*CP*GP*AP*UP*GP*GP*CP*GP*AP*AP*G)-3', RNA (31-MER), 5'-R(P*UP*UP*CP*CP*CP*GP*GP*GP*CP*CP*UP*GP*GP*GP*GP*CP*CP*CP*GP*C)-3', ...
Authors:Sharma, M.R., Barat, C., Agrawal, R.K.
Deposit date:2005-04-02
Release date:2005-05-17
Last modified:2013-12-18
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
1X1L
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INTERACTION OF ERA,A GTPASE PROTEIN, WITH THE 3'MINOR DOMAIN OF THE 16S RRNA WITHIN THE THERMUS THERMOPHILUS 30S SUBUNIT.
Descriptor:RNA (130-MER), GTP-binding protein era
Authors:Sharma, M.R., Barat, C., Agrawal, R.K.
Deposit date:2005-04-06
Release date:2005-05-17
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005