Author results

5DAT
  • Download 5dat
  • View 5dat
Molmil generated image of 5dat
COMPLEX OF YEAST 80S RIBOSOME WITH HYPUSINE-CONTAINING EIF5A
分子名称:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
登録日2015-08-20
公開日2016-08-31
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
1YKQ
  • Download 1ykq
  • View 1ykq
Molmil generated image of 1ykq
CRYSTAL STRUCTURE OF DIELS-ALDER RIBOZYME
分子名称:Diels-Alder ribozyme, CADMIUM ION, MAGNESIUM ION
著者Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
登録日2005-01-18
公開日2005-02-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
1YKV
  • Download 1ykv
  • View 1ykv
Molmil generated image of 1ykv
CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE
分子名称:Diels-Alder ribozyme, (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION
著者Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
登録日2005-01-18
公開日2005-02-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
1YLS
  • Download 1yls
  • View 1yls
Molmil generated image of 1yls
CRYSTAL STRUCTURE OF SELENIUM-MODIFIED DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE
分子名称:RNA Diels-Alder ribozyme, (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION
著者Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
登録日2005-01-19
公開日2005-02-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
3C3Z
  • Download 3c3z
  • View 3c3z
Molmil generated image of 3c3z
CRYSTAL STRUCTURE OF HIV-1 SUBTYPE F DIS EXTENDED DUPLEX RNA BOUND TO RIBOSTAMYCIN
分子名称:HIV-1 subtype F genomic RNA, RIBOSTAMYCIN
著者Freisz, S., Lang, K., Micura, R., Dumas, P., Ennifar, E.
登録日2008-01-29
公開日2008-05-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C5D
  • Download 3c5d
  • View 3c5d
Molmil generated image of 3c5d
CRYSTAL STRUCTURE OF HIV-1 SUBTYPE F DIS EXTENDED DUPLEX RNA BOUND TO LIVIDOMYCIN
分子名称:'HIV-1 subtype F genomic RNA, POTASSIUM ION, (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL
著者Freisz, S., Lang, K., Micura, R., Dumas, P., Ennifar, E.
登録日2008-01-31
公開日2008-05-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C7R
  • Download 3c7r
  • View 3c7r
Molmil generated image of 3c7r
CRYSTAL STRUCTURE OF HIV-1 SUBTYPE F DIS EXTENDED DUPLEX RNA BOUND TO NEOMYCIN
分子名称:HIV-1 subtype F genomic RNA, NEOMYCIN, POTASSIUM ION
著者Freisz, S., Lang, K., Micura, R., Dumas, P., Ennifar, E.
登録日2008-02-08
公開日2008-05-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3CJZ
  • Download 3cjz
  • View 3cjz
Molmil generated image of 3cjz
EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS
分子名称:RNA (5'-R(*GP*GP*AP*CP*GP*(M2G)P*AP*CP*GP*UP*CP*CP*U)-3')
著者Pallan, P.S., Kreutz, C., Bosio, S., Micura, R., Egli, M.
登録日2008-03-14
公開日2008-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m2 2G:A pairs.
Rna, 14, 2008
3DVZ
  • Download 3dvz
  • View 3dvz
Molmil generated image of 3dvz
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA
分子名称:Sarcin/Ricin Domain from E. Coli 23 S rRNA, GLYCEROL
著者Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW4
  • Download 3dw4
  • View 3dw4
Molmil generated image of 3dw4
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA, U2650-OCH3 MODIFIED
分子名称:Sarcin/Ricin Domain from E. Coli 23 S rRNA, GLYCEROL
著者Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW5
  • Download 3dw5
  • View 3dw5
Molmil generated image of 3dw5
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23S RRNA, U2656-OCH3 MODIFIED
分子名称:Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW6
  • Download 3dw6
  • View 3dw6
Molmil generated image of 3dw6
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA, U2650-SECH3 MODIFIED
分子名称:Sarcin/Ricin Domain from E. Coli 23 S rRNA, GLYCEROL
著者Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW7
  • Download 3dw7
  • View 3dw7
Molmil generated image of 3dw7
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA, U2656-SECH3 MODIFIED
分子名称:Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3S7C
  • Download 3s7c
  • View 3s7c
Molmil generated image of 3s7c
CRYSTAL STRUCTURE OF A 2'-AZIDO-URIDINE-MODIFIED RNA
分子名称:Ecoli 23 S rRNA Sarcin Ricin loop
著者Ennifar, E., Micura, R.
登録日2011-05-26
公開日2012-04-11
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling.
Acs Chem.Biol., 7, 2012
3S8U
  • Download 3s8u
  • View 3s8u
Molmil generated image of 3s8u
CRYSTAL STRUCTURE OF A 2-AZIDO-ADENINE-MODIFIED RNA
分子名称:Ecoli 23 S rRNA Sarcin Ricin loop
著者Ennifar, E., Micura, R.
登録日2011-05-31
公開日2012-04-11
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling.
Acs Chem.Biol., 7, 2012
4NLF
  • Download 4nlf
  • View 4nlf
Molmil generated image of 4nlf
2'-TRIFLUOROMETHYLTHIO-2'-DEOXYCYTIDINE-MODIFIED SRL
分子名称:23S ribosomal RNA Sarcin Ricin Loop, SULFATE ION
著者Ennifar, E., Micura, R., Kosutic, M.
登録日2013-11-14
公開日2014-11-19
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献2'-Trifluoromethylthio-modified RNA: synthesis, X-ray structure, thermodynamic analysis, and applications
To be Published
4NMG
  • Download 4nmg
  • View 4nmg
Molmil generated image of 4nmg
2'-TRIFLUOROMETHYLTHIO-2'-DEOXYURIDINE-MODIFIED SRL
分子名称:23S ribosomal RNA Sarcin Ricin Loop
著者Ennifar, E., Micura, R., Kosutic, M.
登録日2013-11-15
公開日2014-11-19
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献2'-Trifluoromethylthio-modified RNA: synthesis, X-ray structure, thermodynamic analysis, and applications
To be Published
4NXH
  • Download 4nxh
  • View 4nxh
Molmil generated image of 4nxh
2'-TRIFLUOROMETHYLTHIOURIDINE-MODIFIED E. COLI 23S RRNA SARCIN RICIN LOOP
分子名称:23S ribosomal RNA Sarcin Ricin Loop, GLYCEROL, SULFATE ION
著者Ennifar, E., Micura, R., Kosutic, M.
登録日2013-12-09
公開日2014-12-10
実験手法X-RAY DIFFRACTION (1.158 Å)
主引用文献2'-Trifluoromethylthio-modified RNA: synthesis, X-ray structure, thermodynamic analysis, and applications
To be Published
4Y27
  • Download 4y27
  • View 4y27
Molmil generated image of 4y27
E.COLI 23S SARCIN-RICIL LOOP, MODIFIED WITH A 2-ME ON G2661 AND A METHYLPHOSPHONATE ON A2662
分子名称:27-mer SRL RNA
著者Ennifar, E., Micura, R., Fluer, S.
登録日2015-02-09
公開日2015-11-18
実験手法X-RAY DIFFRACTION (0.998 Å)
主引用文献Role of a ribosomal RNA phosphate oxygen during the EF-G-triggered GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DC3
  • Download 5dc3
  • View 5dc3
Molmil generated image of 5dc3
COMPLEX OF YEAST 80S RIBOSOME WITH NON-MODIFIED EIF5A
分子名称:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
登録日2015-08-23
公開日2016-06-01
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Crystal Structure of Hypusine-Containing Translation Factor eIF5A Bound to a Rotated Eukaryotic Ribosome.
J.Mol.Biol., 428, 2016
5DGE
  • Download 5dge
  • View 5dge
Molmil generated image of 5dge
COPING WITH PROLINE STALLING: STRUCTURAL BASIS OF HYPUSINE-INDUCED PROTEIN SYNTHESIS BY THE EUKARYOTIC RIBOSOME
分子名称:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
登録日2015-08-27
公開日2017-01-25
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5DGF
  • Download 5dgf
  • View 5dgf
Molmil generated image of 5dgf
COMPLEX OF YEAST 80S RIBOSOME WITH HYPUSINE-CONTAINING/NON-MODIFIED EIF5A AND/OR A PEPTIDYL-TRNA ANALOG
分子名称:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
登録日2015-08-27
公開日2016-12-14
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5DGV
  • Download 5dgv
  • View 5dgv
Molmil generated image of 5dgv
COMPLEX OF YEAST 80S RIBOSOME WITH HYPUSINE-CONTAINING/NON-MODIFIED EIF5A AND/OR A PEPTIDYL-TRNA ANALOG
分子名称:Saccharomyces cerevisiae S288c RDN37-1 miscRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
登録日2015-08-28
公開日2016-12-14
最終更新日2017-03-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5DUN
  • Download 5dun
  • View 5dun
Molmil generated image of 5dun
THE CRYSTAL STRUCTURE OF OME SUBSTITUTED TWISTER RIBOZYME
分子名称:RNA (54-MER), MAGNESIUM ION, POTASSIUM ION
著者Ren, A., Patel, D.J., Micura, R., Rajashankar, K.R.
登録日2015-09-19
公開日2015-10-28
最終更新日2016-01-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献A Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class.
Angew.Chem.Int.Ed.Engl., 54, 2015
5MRX
  • Download 5mrx
  • View 5mrx
Molmil generated image of 5mrx
27-NT SRL WITH A 5-HYDROXYMETHYL CYTIDINE MODIFICATION
分子名称:RNA (27-MER)
著者Ennifar, E., Micura, R.
登録日2016-12-28
公開日2018-01-17
実験手法X-RAY DIFFRACTION (0.851 Å)
主引用文献Xray structure of 5hmrc-modified RNA at atomic resolution
To Be Published
<12>
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 日本蛋白質構造データバンク