5DC3

Complex of yeast 80S ribosome with non-modified eIF5A

This is a large structure.

Summary for 5DC3

Descriptor18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... (86 entities in total)
Functional Keywordsribosome, complex, eif5a
Biological sourceSaccharomyces cerevisiae S288c
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Total number of polymer chains163
Total molecular weight6288663.58
Authors
Melnikov, S.,Mailliot, J.,Shin, B.-S.,Rigger, L.,Yusupova, G.,Micura, R.,Dever, T.E.,Yusupov, M. (deposition date: 2015-08-23, release date: 2016-06-01, Last modification date: 2019-02-20)
Primary citation
Melnikov, S.,Mailliot, J.,Shin, B.S.,Rigger, L.,Yusupova, G.,Micura, R.,Dever, T.E.,Yusupov, M.
Crystal Structure of Hypusine-Containing Translation Factor eIF5A Bound to a Rotated Eukaryotic Ribosome.
J.Mol.Biol., 428:3570-3576, 2016
PubMed: 27196944 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2016.05.011
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.25 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliersRNA backbone12 5.1% 15.1% 14.7% 0.48MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report