E.coli 16S rRNA Sarcin-Ricin Loop containing a 5-hydroxymethylcytosine modification

Summary for 5NQI

DescriptorE.Coli 27-mer SRL RNA (2 entities in total)
Functional Keywordsrna, modification
Biological sourceEscherichia coli
Total number of polymer chains1
Total molecular weight8774.28
Ennifar, E.,Micura, R. (deposition date: 2017-04-20, release date: 2017-07-26, Last modification date: 2017-08-16)
Primary citation
Riml, C.,Lusser, A.,Ennifar, E.,Micura, R.
Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine.
J. Org. Chem., 82:7939-7945, 2017
PubMed: 28707898 (PDB entries with the same primary citation)
DOI: 10.1021/acs.joc.7b01171
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRSRZ outliersRNA backbone0.177000.73MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5nqi
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Molmil generated image of 5nqi
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Molmil generated image of 5nqi
rotated about y axis by 90°