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1NB8
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1nb8
STRUCTURE OF THE CATALYTIC DOMAIN OF USP7 (HAUSP)
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7
Authors:Hu, M., Li, P., Li, M., Li, W., Yao, T., Wu, J.-W., Gu, W., Cohen, R.E., Shi, Y.
Deposit date:2002-12-02
Release date:2003-01-07
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde
Cell(Cambridge,Mass.), 111, 2002
1VJV
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1vjv
CRYSTAL STRUCTURE OF UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6 (YFR010W) FROM SACCHAROMYCES CEREVISIAE AT 1.74 A RESOLUTION
Descriptor:Ubiquitin carboxyl-terminal hydrolase 6 (E.C.3.1.2.15)
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-03-29
Release date:2004-09-21
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of Ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from Saccharomyces cerevisiae at 1.74 A resolution
To be published
2AYN
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2ayn
STRUCTURE OF USP14, A PROTEASOME-ASSOCIATED DEUBIQUITINATING ENZYME
Descriptor:Ubiquitin carboxyl-terminal hydrolase 14 (E.C.3.1.2.15)
Authors:Hu, M., Li, P., Jeffrey, P.D., Shi, Y.
Deposit date:2005-09-07
Release date:2005-10-18
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14.
Embo J., 24, 2005
2DAG
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2dag
SOLUTION STRUCTURE OF THE FIRST UBA DOMAIN IN THE HUMAN UBIQUITIN SPECIFIC PROTEASE 5 (ISOPEPTIDASE 5)
Descriptor:Ubiquitin carboxyl-terminal hydrolase 5 (E.C.3.1.2.15)
Authors:Zhao, C., Kigawa, T., Tomizawa, T., Koshiba, S., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-06-14
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of the First UBA Domain in the Human Ubiquitin Specific Protease 5 (Isopeptidase 5)
To be Published
2GFO
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2gfo
STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 8
Descriptor:Ubiquitin carboxyl-terminal hydrolase 8 (E.C.3.1.2.15)
Authors:Walker, J.R., Avvakumov, G.V, Xue, S., Newman, E.M., Finerty Jr., P.J., Butler-Cole, C., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2006-03-22
Release date:2006-04-04
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Amino-terminal Dimerization, NRDP1-Rhodanese Interaction, and Inhibited Catalytic Domain Conformation of the Ubiquitin-specific Protease 8 (USP8).
J.Biol.Chem., 281, 2006
2VHF
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2vhf
STRUCTURE OF THE CYLD USP DOMAIN
Descriptor:UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD (E.C.3.1.2.15)
Authors:Komander, D., Lord, C.J., Scheel, H., Swift, S., Hofmann, K., Ashworth, A., Barford, D.
Deposit date:2007-11-21
Release date:2008-03-11
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure of the Cyld Usp Domain Explains its Specificity for Lys63-Linked Polyubiquitin and Reveals a B-Box Module
Mol.Cell.Biol., 29, 2008
2Y6E
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2y6e
STRUCTURE OF THE D1D2 DOMAIN OF USP4, THE CONSERVED CATALYTIC DOMAIN
Descriptor:UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 (E.C.3.1.2.15)
Authors:Luna-Vargas, M.P.A., Faesen, A.C., van Dijk, W.J., Rape, M., Fish, A., Sixma, T.K.
Deposit date:2011-01-20
Release date:2011-04-06
Modification date:2014-12-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Dusp-Ubl Domain of Usp4 Enhances its Catalytic Efficiency by Promoting Ubiquitin Exchange.
Nat.Commun., 5, 2014
3I3T
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3i3t
CRYSTAL STRUCTURE OF COVALENT UBIQUITIN-USP21 COMPLEX
Descriptor:Ubiquitin carboxyl-terminal hydrolase 21 (E.C.3.1.2.15)
Authors:Neculai, D., Avvakumov, G.V., Walker, J.R., Xue, S., Butler-Cole, C., Weigelt, J., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2009-06-30
Release date:2009-07-21
Modification date:2013-02-27
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
4M5W
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4m5w
CRYSTAL STRUCTURE OF THE USP7/HAUSP CATALYTIC DOMAIN
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7 (E.C.3.4.19.12)
Authors:Molland, K.L., Mesecar, A.D., Zhou, Q.
Deposit date:2013-08-08
Release date:2014-03-12
Modification date:2014-09-24
Method:X-RAY DIFFRACTION (2.244 Å)
Cite:A 2.2 angstrom resolution structure of the USP7 catalytic domain in a new space group elaborates upon structural rearrangements resulting from ubiquitin binding.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4M5X
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4m5x
CRYSTAL STRUCTURE OF THE USP7/HAUSP CATALYTIC DOMAIN
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7 (E.C.3.4.19.12)
Authors:Mesecar, A.D., Molland, K.L., Zhou, Q.
Deposit date:2013-08-08
Release date:2014-03-12
Modification date:2014-09-24
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:A 2.2 angstrom resolution structure of the USP7 catalytic domain in a new space group elaborates upon structural rearrangements resulting from ubiquitin binding.
Acta Crystallogr F Struct Biol Commun, 70, 2014
1NBF
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1nbf
CRYSTAL STRUCTURE OF A UBP-FAMILY DEUBIQUITINATING ENZYME IN ISOLATION AND IN COMPLEX WITH UBIQUITIN ALDEHYDE
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7
Authors:Hu, M., Li, P., Li, M., Li, W., Yao, T., Wu, J.-W., Gu, W., Cohen, R.E., Shi, Y.
Deposit date:2002-12-02
Release date:2003-01-07
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde
Cell(Cambridge,Mass.), 111, 2002
1VEK
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1vek
SOLUTION STRUCTURE OF RSGI RUH-011, A UBA DOMAIN FROM ARABIDOPSIS CDNA
Descriptor:ubiquitin-specific protease 14, putative
Authors:Higuchi, Y., Abe, T., Hirota, H., Saito, K., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-31
Release date:2004-09-30
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
To be Published
1WIV
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1wiv
SOLUTION STRUCTURE OF RSGI RUH-023, A UBA DOMAIN FROM ARABIDOPSIS CDNA
Descriptor:ubiquitin-specific protease 14
Authors:Higuchi, Y., Abe, T., Hirota, H., Izumi, K., Yoshida, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
To be Published
2AYO
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2ayo
STRUCTURE OF USP14 BOUND TO UBQUITIN ALDEHYDE
Descriptor:Ubiquitin carboxyl-terminal hydrolase 14 (E.C.3.1.2.15)
Authors:Hu, M., Li, P., Jeffrey, P.D., Shi, Y.
Deposit date:2005-09-07
Release date:2005-10-18
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14.
Embo J., 24, 2005
2DAK
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2dak
SOLUTION STRUCTURE OF THE SECOND UBA DOMAIN IN THE HUMAN UBIQUITIN SPECIFIC PROTEASE 5 (ISOPEPTIDASE 5)
Descriptor:Ubiquitin carboxyl-terminal hydrolase 5 (E.C.3.1.2.15)
Authors:Zhao, C., Kigawa, T., Sato, M., Koshiba, S., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-06-14
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of the Second UBA Domain in the Human Ubiquitin Specific Protease 5 (Isopeptidase 5)
To be Published
2F1Z
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2f1z
CRYSTAL STRUCTURE OF HAUSP
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7 (E.C.3.1.2.15)
Authors:Hu, M., Gu, L., Jeffrey, P.D., Shi, Y.
Deposit date:2005-11-15
Release date:2006-02-07
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Competitive Recognition of p53 and MDM2 by HAUSP/USP7: Implications for the Regulation of the p53-MDM2 Pathway.
Plos Biol., 4, 2006
2HD5
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2hd5
USP2 IN COMPLEX WITH UBIQUITIN
Descriptor:Ubiquitin carboxyl-terminal hydrolase 2 (E.C.3.1.2.15), Polyubiquitin
Authors:Renatus, M., Kroemer, M.
Deposit date:2006-06-20
Release date:2006-08-15
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis of Ubiquitin Recognition by the Deubiquitinating Protease USP2.
Structure, 14, 2006
2IBI
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2ibi
COVALENT UBIQUITIN-USP2 COMPLEX
Descriptor:Ubiquitin carboxyl-terminal hydrolase 2 (E.C.3.1.2.15)
Authors:Walker, J.R., Avvakumov, G.V., Bernstein, G., Xue, S., Finerty Jr., P.J., MacKenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2006-09-11
Release date:2006-10-24
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Covalent Ubiquitin-USP2 Complex
To be Published
2LBC
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2lbc
SOLUTION STRUCTURE OF TANDEM UBA OF USP13
Descriptor:Ubiquitin carboxyl-terminal hydrolase 13 (E.C.3.4.19.12)
Authors:Zhang, Y., Zhou, C., Zhou, Z., Song, A., Hu, H.
Deposit date:2011-03-29
Release date:2012-03-07
Method:SOLUTION NMR
Cite:Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin.
Plos One, 6, 2011
2Y5B
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2y5b
STRUCTURE OF USP21 IN COMPLEX WITH LINEAR DIUBIQUITIN-ALDEHYDE
Descriptor:UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 (E.C.3.1.2.15, 3.4.19.12)
Authors:Ye, Y., Akutsu, M., Reyes-Turcu, F., Enchev, R.I., Wilkinson, K.D., Komander, D.
Deposit date:2011-01-12
Release date:2012-01-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21.
Embo Rep., 12, 2011
3IHP
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3ihp
COVALENT UBIQUITIN-USP5 COMPLEX
Descriptor:Ubiquitin carboxyl-terminal hydrolase 5 (E.C.3.1.2.15)
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Butler-Cole, C., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2009-07-30
Release date:2009-12-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Covalent Ubiquitin-Usp5 Complex
To be Published
3M99
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3m99
STRUCTURE OF THE UBP8-SGF11-SGF73-SUS1 SAGA DUB MODULE
Descriptor:Ubp8, SAGA-associated factor 11, Protein SUS1, SAGA-associated factor 73
Authors:Kohler, A., Zimmerman, E., Schneider, M., Hurt, E., Zheng, N.
Deposit date:2010-03-21
Release date:2010-05-05
Modification date:2010-07-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for assembly and activation of the heterotetrameric SAGA histone H2B deubiquitinase module.
Cell(Cambridge,Mass.), 141, 2010
3MHH
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3mhh
STRUCTURE OF THE SAGA UBP8/SGF11/SUS1/SGF73 DUB MODULE
Descriptor:Ubiquitin carboxyl-terminal hydrolase 8 (E.C.3.1.2.15), Protein SUS1, SAGA-associated factor 11, SAGA-associated factor 73
Authors:Samara, N.L., Datta, A.B., Berndsen, C.E., Zhang, X., Yao, T., Cohen, R.E., Wolberger, C.
Deposit date:2010-04-08
Release date:2010-04-21
Modification date:2010-06-09
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural insights into the assembly and function of the SAGA deubiquitinating module.
Science, 328, 2010
3MHS
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3mhs
STRUCTURE OF THE SAGA UBP8/SGF11/SUS1/SGF73 DUB MODULE BOUND TO UBIQUITIN ALDEHYDE
Descriptor:Ubiquitin carboxyl-terminal hydrolase 8 (E.C.3.1.2.15), Protein SUS1, SAGA-associated factor 11, SAGA-associated factor 73, ubiquitin
Authors:Samara, N.L., Datta, A.B., Berndsen, C.E., Zhang, X., Yao, T., Cohen, R.E., Wolberger, C.
Deposit date:2010-04-08
Release date:2010-04-21
Modification date:2010-06-09
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insights into the assembly and function of the SAGA deubiquitinating module.
Science, 328, 2010
3MTN
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3mtn
USP21 IN COMPLEX WITH A UBIQUITIN-BASED, USP21-SPECIFIC INHIBITOR
Descriptor:UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 (E.C.3.1.2.15), UBIQUITIN VARIANT UBV.21.4
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Li, Y., Ernst, A., Sidhu, S., Weigelt, J., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2010-04-30
Release date:2010-06-09
Modification date:2013-02-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
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105097
entries available on 2014-12-17
00:00 UTC / 09:00 JST