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eProtS

eProtS (dictionary with pictures of the 
 protein three-dimensional structures)

eProtS (Encyclopedia of Protein Structures) is a dictionary with pictures of the protein three-dimensional structures, for understanding the tertiary structures and the biological functions for several selected protein molecules that are particularly important for biology. This Web site can be prepared for the general audience. As it is a wiki-based repository of documents, any people can deposit or edit documents as well as browse.

URL: http://pdbj.org/eprots/index_en.cgi

Molecule of the Month

Molecule of the Month

Introduction to biological macromolecules written by Dr. David S. Goodsell of RCSB. A new article will be uploaded every month. The original site at RCSB is here. The Japanese translation at PDBj is in the site below.

URL: http://pdbj.org/mom

"Molecule of the Month" is also introduced in the following journal.

Goodsell DS, Dutta S, Zardecki C, Voigt M, Berman HM, Burley SK (2015) The RCSB PDB “Molecule of the Month”: Inspiring a Molecular View of Biology. PLoS Biol 13(5): e1002140. doi:10.1371/journal.pbio.1002140

Previous workshop

Previous workshop

Materials used in the previous workshop and tutorials are available from the site below.

URL: http://pdbj.org/showBlogPost?PID=46

PDBj Games

Two types of games about protein are available.

PDBj Games

Pelmanism game

Pelmanism game to search pairs with same amino acid or protein by turning over cards.

URL: http://pdbj.org/pelmanismGame

Snake game

PDBjゲーム

This is the "Snake Game". Operate "Ribosome", which construct protein chain, to create the specified peptide sequence. When it crashes to the wall, the life decreases. The game is over when the rest life comes to zero.

URL: http://pdbj.org/aminoSnakeGame

2013-03-26 (last edited: 7 months ago)2016-07-12
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