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PDB: 1113 results

4V43
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BU of 4v43 by Molmil
Structural and mechanistic basis for allostery in the bacterial chaperonin GroEL
Descriptor: GROEL PROTEIN
Authors:Wang, J.
Deposit date:2002-01-02
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:A GroEL/GroES complex structure revisited: the structure-based mechanism of ATP hydrolysis
To be Published
1CCP
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BU of 1ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
Authors:Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
Deposit date:1990-02-28
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
1WAJ
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BU of 1waj by Molmil
DNA POLYMERASE FROM BACTERIOPHAGE RB69
Descriptor: DNA POLYMERASE, GUANOSINE-5'-MONOPHOSPHATE
Authors:Wang, J, Satter, A.K.M.A, Wang, C.C, Karam, J.D, Konigsberg, W.H, Steitz, T.A.
Deposit date:1997-04-13
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a pol alpha family replication DNA polymerase from bacteriophage RB69.
Cell(Cambridge,Mass.), 89, 1997
1WAF
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BU of 1waf by Molmil
DNA POLYMERASE FROM BACTERIOPHAGE RB69
Descriptor: DNA POLYMERASE, GUANOSINE
Authors:Wang, J, Satter, A.K.M.A, Wang, C.C, Karam, J.D, Konigsberg, W.H, Steitz, T.A.
Deposit date:1997-04-13
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a pol alpha family replication DNA polymerase from bacteriophage RB69.
Cell(Cambridge,Mass.), 89, 1997
1YYF
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BU of 1yyf by Molmil
Correction of X-ray Intensities from an HslV-HslU co-crystal containing lattice translocation defects
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent hsl protease ATP-binding subunit hslU, ATP-dependent protease hslV
Authors:Wang, J, Rho, S.H, Park, H.H, Eom, S.H.
Deposit date:2005-02-24
Release date:2005-07-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (4.16 Å)
Cite:Correction of X-ray intensities from an HslV-HslU co-crystal containing lattice-translocation defects.
Acta Crystallogr.,Sect.D, 61, 2005
2CCP
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BU of 2ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
Authors:Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
Deposit date:1990-02-28
Release date:1991-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
7MKK
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BU of 7mkk by Molmil
Crystal structure of Drosophila Panoramix in complex with Sov NTD
Descriptor: Protein panoramix, Small ovary, isoform A
Authors:Wang, J, Patel, D.J.
Deposit date:2021-04-24
Release date:2022-02-02
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Panoramix SUMOylation on chromatin connects the piRNA pathway to the cellular heterochromatin machinery.
Nat.Struct.Mol.Biol., 29, 2022
6WOO
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BU of 6woo by Molmil
CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal rRNA, ...
Authors:Wang, J, Wang, J, Puglisi, J, Fernandez, I.S.
Deposit date:2020-04-25
Release date:2020-09-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An active role of the eukaryotic large ribosomal subunit in translation initiation fidelity.
To Be Published
8I4Z
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BU of 8i4z by Molmil
CalA3 with hydrolysis product
Descriptor: 11-oxidanylidene-11-(1~{H}-pyrrol-2-yl)undecanoic acid, Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2023-01-21
Release date:2023-02-22
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
8I4Y
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BU of 8i4y by Molmil
CalA3 complex structure with amidation product
Descriptor: 11-oxidanylidene-11-(1~{H}-pyrrol-2-yl)undecanoic acid, 3-HYDROXYANTHRANILIC ACID, Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2023-01-21
Release date:2023-02-22
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
5GNF
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BU of 5gnf by Molmil
Crystal structure of anti-CRISPR protein AcrF3
Descriptor: CALCIUM ION, Uncharacterized protein AcrF3
Authors:Wang, J, Wang, Y.
Deposit date:2016-07-20
Release date:2016-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A CRISPR evolutionary arms race: structural insights into viral anti-CRISPR/Cas responses
Cell Res., 26, 2016
6OPF
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BU of 6opf by Molmil
Crystal structure of dmNxf2 UBA domain fused with Panoramix helix
Descriptor: Nuclear RNA export factor 2, Panoramix fusion
Authors:Wang, J, Patel, D.J.
Deposit date:2019-04-24
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation.
Nat.Struct.Mol.Biol., 26, 2019
7R76
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BU of 7r76 by Molmil
Cryo-EM structure of DNMT5 in apo state
Descriptor: DNA repair protein Rad8, ZINC ION
Authors:Wang, J, Patel, D.J.
Deposit date:2021-06-24
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
8HW2
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BU of 8hw2 by Molmil
Cryo-EM structure of beta-estradiol 17-(beta-D-glucuronide)-bound human ABC transporter ABCC3 in nanodiscs
Descriptor: ATP-binding cassette sub-family C member 3, Estradiol-17beta-glucuronide
Authors:Wang, J, Wang, F.F, Chen, Y.X, Zhou, C.Z.
Deposit date:2022-12-28
Release date:2023-06-07
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Placing steroid hormones within the human ABCC3 transporter reveals a compatible amphiphilic substrate-binding pocket.
Embo J., 42, 2023
8HW4
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BU of 8hw4 by Molmil
Cryo-EM structure of dehydroepiandrosterone sulfate-bound human ABC transporter ABCC3 in nanodiscs
Descriptor: 17-oxoandrost-5-en-3beta-yl hydrogen sulfate, ATP-binding cassette sub-family C member 3
Authors:Wang, J, Wang, F.F, Chen, Y.X, Zhou, C.Z.
Deposit date:2022-12-28
Release date:2023-06-07
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Placing steroid hormones within the human ABCC3 transporter reveals a compatible amphiphilic substrate-binding pocket.
Embo J., 42, 2023
8HVH
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BU of 8hvh by Molmil
Cryo-EM structure of ABC transporter ABCC3
Descriptor: ATP-binding cassette sub-family C member 3
Authors:Wang, J, Wang, F.F, Chen, Y.X, Zhou, C.Z.
Deposit date:2022-12-26
Release date:2023-06-07
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Placing steroid hormones within the human ABCC3 transporter reveals a compatible amphiphilic substrate-binding pocket.
Embo J., 42, 2023
4CCP
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BU of 4ccp by Molmil
X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, YEAST CYTOCHROME C PEROXIDASE
Authors:Wang, J, Mauro, J.M, Edwards, S.L, Oatley, S.J, Fishel, L.A, Ashford, V.A, Xuong, N.-H, Kraut, J.
Deposit date:1990-02-28
Release date:1991-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of recombinant yeast cytochrome c peroxidase and three heme-cleft mutants prepared by site-directed mutagenesis.
Biochemistry, 29, 1990
3CFP
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BU of 3cfp by Molmil
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 1
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DAP*DCP*DAP*DGP*DGP*DTP*DAP*DAP*DGP*DCP*DAP*DGP*DTP*DCP*DCP*DGP*DCP*DG)-3'), ...
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
5DQU
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BU of 5dqu by Molmil
Crystal Structure of Cas-DNA-10 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*TP*TP*TP*T)-3'), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
3CFR
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BU of 3cfr by Molmil
Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*(DOC))-3'), ...
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
3CFO
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BU of 3cfo by Molmil
Triple Mutant APO structure
Descriptor: DNA polymerase, GUANOSINE, SULFATE ION
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
5DQT
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BU of 5dqt by Molmil
Crystal Structure of Cas-DNA-22 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (33-MER), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
5DLJ
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BU of 5dlj by Molmil
Crystal Structure of Cas-DNA-N1 complex
Descriptor: 39-mer DNA N1-F, 39-mer DNA N1-R, CRISPR-associated endonuclease Cas1, ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-05
Release date:2015-11-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
5DQZ
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BU of 5dqz by Molmil
Crystal Structure of Cas-DNA-PAM complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (36-MER), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
6XFQ
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BU of 6xfq by Molmil
Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
Descriptor: Platelet glycoprotein Ib alpha chain, Snaclec agglucetin subunit alpha-1, Snaclec agglucetin subunit beta-2
Authors:Wang, J, Gao, Y.X, Ke, J.Y, Zhu, Z.L, Niu, L.W.
Deposit date:2020-06-16
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
To be published

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