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4UMM
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BU of 4umm by Molmil
The Cryo-EM structure of the palindromic DNA-bound USP-EcR nuclear receptor reveals an asymmetric organization with allosteric domain positioning
分子名称: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, 5'-D(*CP*AP*AP*GP*GP*GP*TP*TP*CP*AP*AP*TP*GP*CP *AP*CP*TP*TP*GP*TP)-3', 5'-D(*DGP*AP*CP*AP*AP*GP*TP*GP*CP*AP*TP*TP*GP*DAP *AP*CP*CP*CP*TP*T)-3', ...
著者Maletta, M, Orlov, I, Moras, D, Billas, I.M.L, Klaholz, B.P.
登録日2014-05-19
公開日2014-06-25
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (11.6 Å)
主引用文献The Palindromic DNA-Bound Usp-Ecr Nuclear Receptor Adopts an Asymmetric Organization with Allosteric Domain Positioning.
Nat.Commun., 5, 2014
5CB0
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BU of 5cb0 by Molmil
Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli
分子名称: 3-oxotetradecanoic acid, Universal stress protein E
著者Xu, Y, Quan, C.S, Jin, X, Jin, L, Kim, J.S, Guo, J, Fan, S, Ha, N.C.
登録日2015-06-30
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.207 Å)
主引用文献Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli.
Bmc Struct.Biol., 16, 2016
1G2N
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BU of 1g2n by Molmil
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ULTRASPIRACLE PROTEIN USP, THE ORTHOLOG OF RXRS IN INSECTS
分子名称: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ULTRASPIRACLE PROTEIN
著者Billas, I.M.L, Moulinier, L, Rochel, N, Moras, D, Structural Proteomics in Europe (SPINE)
登録日2000-10-20
公開日2001-04-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the ligand-binding domain of the ultraspiracle protein USP, the ortholog of retinoid X receptors in insects.
J.Biol.Chem., 276, 2001
2VHF
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BU of 2vhf by Molmil
Structure of the CYLD USP domain
分子名称: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD, ZINC ION
著者Komander, D, Lord, C.J, Scheel, H, Swift, S, Hofmann, K, Ashworth, A, Barford, D.
登録日2007-11-21
公開日2008-03-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Structure of the Cyld Usp Domain Explains its Specificity for Lys63-Linked Polyubiquitin and Reveals a B-Box Module
Mol.Cell.Biol., 29, 2008
2NXX
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BU of 2nxx by Molmil
Crystal Structure of the Ligand-Binding Domains of the T.castaneum (Coleoptera) Heterodimer EcrUSP Bound to Ponasterone A
分子名称: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, Ecdysone Receptor (EcR, NRH1), ...
著者Iwema, T, Billas, I, Moras, D.
登録日2006-11-20
公開日2007-10-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor.
Embo J., 26, 2007
8PZ3
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BU of 8pz3 by Molmil
TssM - A USP-like DUB from B. pseudomallei (193-430)
分子名称: TssM
著者Uthoff, M, Hermanns, T, Hofmann, K, Baumann, U.
登録日2023-07-26
公開日2023-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献The structural basis for deubiquitination by the fingerless USP-type effector TssM.
Life Sci Alliance, 7, 2024
8Q00
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BU of 8q00 by Molmil
TssM-Ub-PA complex - A USP-like DUB from B. pseudomallei (193-430) reacted with Ub-PA
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Polyubiquitin-B, ...
著者Uthoff, M, Hermanns, T, Hofmann, K, Baumann, U.
登録日2023-07-27
公開日2023-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The structural basis for deubiquitination by the fingerless USP-type effector TssM.
Life Sci Alliance, 7, 2024
3WXG
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Crystal structure of CYLD USP domain (C596A) in complex with Lys63-linked diubiquitin
分子名称: Ubiquitin, Uncharacterized protein
著者Sato, Y, Fukai, S.
登録日2014-07-30
公開日2015-02-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.
Nat.Struct.Mol.Biol., 22, 2015
3WXE
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BU of 3wxe by Molmil
Crystal structure of CYLD USP domain (C596S) in complex with Met1-linked diubiquitin
分子名称: Ubiquitin, Uncharacterized protein
著者Sato, Y, Fukai, S.
登録日2014-07-30
公開日2015-02-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.
Nat.Struct.Mol.Biol., 22, 2015
3WXF
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BU of 3wxf by Molmil
Crystal structure of CYLD USP domain (C596S E674Q) in complex with Met1-linked diubiquitin
分子名称: SULFATE ION, Ubiquitin, Uncharacterized protein
著者Sato, Y, Fukai, S.
登録日2014-07-30
公開日2015-02-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.
Nat.Struct.Mol.Biol., 22, 2015
3IDF
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BU of 3idf by Molmil
The Crystal Structure of a USP-like protein from Wolinella succinogenes to 2.0A
分子名称: SULFATE ION, USP-like protein
著者Stein, A.J, Sather, A, Shackelford, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-07-21
公開日2009-08-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of a USP-like protein from Wolinella succinogenes to 2.0A
To be Published
4OZT
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BU of 4ozt by Molmil
crystal structure of the ligand binding domains of the Bovicola ovis ecdysone receptor EcR/USP heterodimer (PonA crystal)
分子名称: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, Ecdysone receptor, N-ETHYLMALEIMIDE, ...
著者Ren, B, Peat, T.S, Streltsov, V.A, Pollard, M, Fernley, R, Grusovin, J, Seabrook, S, Pilling, P, Phan, T, Lu, L, Lovrecz, G.O, Graham, L.D, Hill, R.J.
登録日2014-02-19
公開日2014-07-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unprecedented conformational flexibility revealed in the ligand-binding domains of the Bovicola ovis ecdysone receptor (EcR) and ultraspiracle (USP) subunits.
Acta Crystallogr.,Sect.D, 70, 2014
4OZR
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BU of 4ozr by Molmil
Crystal structure of the ligand binding domains of the Bovicola ovis ecdysone receptor EcR/USP heterodimer (methylene lactam crystal)
分子名称: Ecdysone receptor, Retinoid X receptor
著者Ren, B, Peat, T.S, Streltsov, V.A, Pollard, M, Fernley, R, Grusovin, J, Seabrook, S, Pilling, P, Phan, T, Lu, L, Lovrecz, G.O, Graham, L.D, Hill, R.J.
登録日2014-02-18
公開日2014-07-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unprecedented conformational flexibility revealed in the ligand-binding domains of the Bovicola ovis ecdysone receptor (EcR) and ultraspiracle (USP) subunits.
Acta Crystallogr.,Sect.D, 70, 2014
7BJV
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BU of 7bjv by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI09181
分子名称: DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
7BJU
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BU of 7bju by Molmil
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI08346
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, Ecdysone Receptor, ...
著者Browning, C, McEwen, A.G, Billas, I.M.L.
登録日2021-01-14
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Nonsteroidal ecdysone receptor agonists use a water channel for binding to the ecdysone receptor complex EcR/USP.
J Pestic Sci, 46, 2021
2Y5B
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BU of 2y5b by Molmil
Structure of USP21 in complex with linear diubiquitin-aldehyde
分子名称: SULFATE ION, UBIQUITIN, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21, ...
著者Ye, Y, Akutsu, M, Reyes-Turcu, F, Enchev, R.I, Wilkinson, K.D, Komander, D.
登録日2011-01-12
公開日2012-01-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21.
Embo Rep., 12, 2011
7CM2
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BU of 7cm2 by Molmil
The Crystal Structure of human USP7 USP domain from Biortus
分子名称: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7
著者Wang, F, Cheng, W, Lv, Z, Lin, D, Zhu, B, Miao, Q, Bao, X, Shang, H.
登録日2020-07-24
公開日2020-08-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The Crystal Structure of human USP7 USP domain from Biortus.
To Be Published
5AHW
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BU of 5ahw by Molmil
Crystal structure of universal stress protein MSMEG_3811 in complex with cAMP
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, ...
著者Adolph, R.S, Kleinboelting, S, Weyand, M, Steegborn, C.
登録日2015-02-10
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Universal Stress Protein (Usp) in Mycobacteria Binds Camp
J.Biol.Chem., 290, 2015
7JI4
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Universal stress protein (USP) domain of KdpD histidine kinase in complex with second messenger c-di-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, KdpD
著者Dutta, A, Parashar, V.
登録日2020-07-22
公開日2021-05-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of KdpD histidine kinase binding to the second messenger c-di-AMP.
J.Biol.Chem., 296, 2021
1HG4
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BU of 1hg4 by Molmil
Ultraspiracle ligand binding domain from Drosophila melanogaster
分子名称: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ULTRASPIRACLE
著者Schwabe, J.W.R, Clayton, G.M.
登録日2000-12-12
公開日2001-02-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Structure of the Ultraspiracle Ligand-Binding Domain Reveals a Nuclear Receptor Locked in an Inactive Conformation
Proc.Natl.Acad.Sci.USA, 98, 2001
3TNJ
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BU of 3tnj by Molmil
Crystal structure of universal stress protein from Nitrosomonas europaea with AMP bound
分子名称: ADENOSINE MONOPHOSPHATE, Universal stress protein (Usp)
著者Tkaczuk, K.L, Chruszcz, M, Shumilin, I.A, Evdokimova, E, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2011-09-01
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
4R2K
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BU of 4r2k by Molmil
Crystal structure of H119A mutant of YdaA (Universal Stress Protein E) from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, OXALIC ACID, SULFATE ION, ...
著者Bangera, M, Murthy, M.R.N.
登録日2014-08-12
公開日2015-02-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance.
J.Struct.Biol., 189, 2015
4R2J
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BU of 4r2j by Molmil
Crystal structure of YdaA (Universal Stress Protein E) from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Universal stress protein E, ...
著者Bangera, M, Murthy, M.R.N.
登録日2014-08-12
公開日2015-02-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance.
J.Struct.Biol., 189, 2015
1R0O
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BU of 1r0o by Molmil
Crystal Structure of the Heterodimeric Ecdysone Receptor DNA-binding Complex
分子名称: Ecdysone Response Element, Ecdysone receptor, Ultraspiracle protein, ...
著者Devarakonda, S, Harp, J.M, Kim, Y, Ozyhar, A, Rastinejad, F.
登録日2003-09-22
公開日2003-10-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure of the Heterodimeric Ecdysone Receptor DNA-binding Complex
Embo J., 22, 2003
2R40
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Crystal structure of 20E bound EcR/USP
分子名称: (2beta,3beta,5beta,22R)-2,3,14,20,22,25-hexahydroxycholest-7-en-6-one, CITRATE ANION, Ecdysone Receptor, ...
著者Moras, D, Billas, I.M.L, Browning, C.
登録日2007-08-30
公開日2007-10-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Critical Role of Desolvation in the Binding of 20-Hydroxyecdysone to the Ecdysone Receptor
J.Biol.Chem., 282, 2007

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