Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8A28
DownloadVisualize
BU of 8a28 by Molmil
Structure of the astacin zymogen of LAST-MAM from Limulus polyphemus
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
著者Guevara, T, Rodriguez Banqueri, A.
登録日2022-06-02
公開日2022-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Zymogenic latency in an ∼250-million-year-old astacin metallopeptidase.
Acta Crystallogr D Struct Biol, 78, 2022
7UAI
DownloadVisualize
BU of 7uai by Molmil
Meprin alpha helix in complex with fetuin-B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bayly-Jones, C, Lupton, C.J, Fritz, C, Schlenzig, D, Whisstock, J.C.
登録日2022-03-13
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Helical ultrastructure of the metalloprotease meprin alpha in complex with a small molecule inhibitor.
Nat Commun, 13, 2022
7UAB
DownloadVisualize
BU of 7uab by Molmil
Human pro-meprin alpha (zymogen state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bayly-Jones, C, Lupton, C.J, Fritz, C, Schlenzig, D, Whisstock, J.C.
登録日2022-03-12
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Helical ultrastructure of the metalloprotease meprin alpha in complex with a small molecule inhibitor.
Nat Commun, 13, 2022
7UAC
DownloadVisualize
BU of 7uac by Molmil
Human pro-meprin alpha (zymogen state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Meprin A subunit alpha, ...
著者Bayly-Jones, C, Lupton, C.J, Fritz, C, Schlenzig, D, Whisstock, J.C.
登録日2022-03-12
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Helical ultrastructure of the metalloprotease meprin alpha in complex with a small molecule inhibitor.
Nat Commun, 13, 2022
7UAE
DownloadVisualize
BU of 7uae by Molmil
Human meprin alpha (active state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Bayly-Jones, C, Lupton, C.J, Fritz, C, Schlenzig, D, Whisstock, J.C.
登録日2022-03-12
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Helical ultrastructure of the metalloprotease meprin alpha in complex with a small molecule inhibitor.
Nat Commun, 13, 2022
7UAF
DownloadVisualize
BU of 7uaf by Molmil
Human meprin alpha inhibitory complex with compound 10d (N~3~,N~3~-bis[(2H-1,3-benzodioxol-5-yl)methyl]-N-hydroxy-beta-alaninamide)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bayly-Jones, C, Lupton, C.J, Fritz, C, Schlenzig, D, Whisstock, J.C.
登録日2022-03-12
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Helical ultrastructure of the metalloprotease meprin alpha in complex with a small molecule inhibitor.
Nat Commun, 13, 2022
7AUW
DownloadVisualize
BU of 7auw by Molmil
Inhibitory complex of human meprin beta with mouse fetuin-B.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fetuin-B, ...
著者Eckhard, U, Gomis-Ruth, F.X.
登録日2020-11-03
公開日2021-04-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of a 250-kDa heterotetrameric particle explains inhibition of sheddase meprin beta by endogenous fetuin-B.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AQ1
DownloadVisualize
BU of 7aq1 by Molmil
Crystal structure of human mature meprin beta in complex with the specific inhibitor MWT-S-270
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Linnert, M, Parthier, C, Fritz, C.
登録日2020-10-20
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.413 Å)
主引用文献Structure and Dynamics of Meprin beta in Complex with a Hydroxamate-Based Inhibitor.
Int J Mol Sci, 22, 2021
6SAZ
DownloadVisualize
BU of 6saz by Molmil
Cleaved human fetuin-b in complex with crayfish astacin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Astacin, ...
著者Gomis-Ruth, F.X, Guevara, T, Cuppari, A, Korschgen, H, Schmitz, C, Kuske, M, Yiallouros, I, Floehr, J, Jahnen-Dechent, W, Stocker, W.
登録日2019-07-18
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The C-terminal region of human plasma fetuin-B is dispensable for the raised-elephant-trunk mechanism of inhibition of astacin metallopeptidases.
Sci Rep, 9, 2019
6HT9
DownloadVisualize
BU of 6ht9 by Molmil
Mouse fetuin-B in complex with crayfish astacin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Astacin, ...
著者Gomis-Ruth, F.X, Goulas, T, Guevara, T, Cuppari, A.
登録日2018-10-03
公開日2019-03-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of mammalian plasma fetuin-B and its mechanism of selective metallopeptidase inhibition.
Iucrj, 6, 2019
5ZJK
DownloadVisualize
BU of 5zjk by Molmil
Structure of myroilysin
分子名称: Myroilysin, PHOSPHATE ION, ZINC ION
著者Li, W.D, Ran, T.T, Xu, D.Q, Wang, W.W.
登録日2018-03-20
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of mature myroilysin and implication for its activation mechanism.
Int.J.Biol.Macromol., 2019
6BTP
DownloadVisualize
BU of 6btp by Molmil
BMP1 complexed with a hydroxamate
分子名称: (1R,3S,4S)-2-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]heptanoyl}-N-(3-methoxypyrazin-2-yl)-2-azabicyclo[2.2.1]heptane-3-carboxamide, Bone morphogenetic protein 1, THIOCYANATE ION, ...
著者Gampe, R, Shewchuk, L.
登録日2017-12-07
公開日2018-08-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
6BTQ
DownloadVisualize
BU of 6btq by Molmil
BMP1 complexed with a hydroxamate - compound 2
分子名称: 1,2-ETHANEDIOL, Bone morphogenetic protein 1, N~2~-[(2H-1,3-benzodioxol-5-yl)methyl]-N-hydroxy-N~2~-[(4-methoxyphenyl)sulfonyl]-3-thiophen-2-yl-D-alaninamide, ...
著者Gampe, R, Shewchuk, L.
登録日2017-12-07
公開日2018-08-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
6BTO
DownloadVisualize
BU of 6bto by Molmil
BMP1 complexed with (2~{S})-2-[[(1~{R},3~{S},4~{S})-2-[(2~{R})-2-[2-(oxidanylamino)-2-oxidanylidene-ethyl]heptanoyl]-2-azabicyclo[2.2.1]heptan-3-yl]carbonylamino]-2-phenyl-ethanoic acid
分子名称: (2~{S})-2-[[(1~{R},3~{S},4~{S})-2-[(2~{R})-2-[2-(oxidanylamino)-2-oxidanylidene-ethyl]heptanoyl]-2-azabicyclo[2.2.1]heptan-3-yl]carbonylamino]-2-phenyl-ethanoic acid, 1,2-ETHANEDIOL, Bone morphogenetic protein 1, ...
著者Gampe, R, Shewchuk, L.
登録日2017-12-07
公開日2018-08-08
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
6BTN
DownloadVisualize
BU of 6btn by Molmil
BMP1 complexed with a reverse hydroxymate - compound 1
分子名称: (3S)-6-cyclohexyl-3-{3-[(dimethylamino)methyl]-1,2,4-oxadiazol-5-yl}-N-hydroxyhexanamide, 1,2-ETHANEDIOL, Bone morphogenetic protein 1, ...
著者Gampe, R, Shewchuk, L.
登録日2017-12-07
公開日2018-08-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
6BSL
DownloadVisualize
BU of 6bsl by Molmil
BMP1 complexed with a reverse hydroxymate - compound 22
分子名称: 1,2-ETHANEDIOL, Bone morphogenetic protein 1, N-(2-ethoxy-4-{5-[({[(2R)-2-{(1R)-1-[formyl(hydroxy)amino]propyl}heptanoyl]amino}methyl)carbamoyl]furan-2-yl}benzene-1-carbonyl)-L-aspartic acid, ...
著者Gampe, R, Shewchuk, L.
登録日2017-12-04
公開日2018-08-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
6BSM
DownloadVisualize
BU of 6bsm by Molmil
BMP1 complexed with a reverse hydroxamate - compound 4
分子名称: Bone morphogenetic protein 1, N-({[(2R)-2-{[hydroxy(hydroxymethyl)amino]methyl}heptanoyl]amino}methyl)-7-methoxy-1-benzofuran-2-carboxamide, ZINC ION
著者Gampe, R, Shewchuk, L.
登録日2017-12-04
公開日2018-08-08
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Reverse Hydroxamate Inhibitors of Bone Morphogenetic Protein 1.
ACS Med Chem Lett, 9, 2018
5GWD
DownloadVisualize
BU of 5gwd by Molmil
Structure of Myroilysin
分子名称: Myroilysin, ZINC ION
著者Xu, D, Ran, T, Wang, W.
登録日2016-09-10
公開日2017-02-15
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Myroilysin Is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Is Activated by a Cysteine Switch Mechanism.
J. Biol. Chem., 292, 2017
5CZW
DownloadVisualize
BU of 5czw by Molmil
Crystal structure of myroilysin
分子名称: Myroilysin, ZINC ION
著者Zhou, J, Ran, T, Xu, D, Wang, W.
登録日2015-08-01
公開日2016-08-03
最終更新日2017-04-26
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Myroilysin is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Activated by a Cysteine-switch Mechanism
J. Biol. Chem., 292, 2017
4GWM
DownloadVisualize
BU of 4gwm by Molmil
Crystal structure of human promeprin beta
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Arolas, J.L, Broder, C, Jefferson, T, Guevara, T, Sterchi, E.E, Bode, W, Stocker, W, Becker-Pauly, C, Gomis-Ruth, F.X.
登録日2012-09-03
公開日2012-09-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the sheddase function of human meprin beta metalloproteinase at the plasma membrane
Proc.Natl.Acad.Sci.USA, 109, 2012
4GWN
DownloadVisualize
BU of 4gwn by Molmil
Crystal structure of human mature meprin beta
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Arolas, J.L, Broder, C, Jefferson, T, Guevara, T, Sterchi, E.E, Bode, W, Stocker, W, Becker-Pauly, C, Gomis-Ruth, F.X.
登録日2012-09-03
公開日2012-09-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the sheddase function of human meprin beta metalloproteinase at the plasma membrane
Proc.Natl.Acad.Sci.USA, 109, 2012
3VTG
DownloadVisualize
BU of 3vtg by Molmil
High choriolytic enzyme 1 (HCE-1), a hatching enzyme zinc-protease from Oryzias latipes (Medaka fish)
分子名称: High choriolytic enzyme 1, ZINC ION
著者Kudo, N, Yasumasu, S, Iuchi, I, Tanokura, M.
登録日2012-05-30
公開日2013-06-05
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal Structure of High choriolytic enzyme 1 (HCE-1), a hatching enzyme from Oryzias latipes (Medaka fish)
To be Published
3LQB
DownloadVisualize
BU of 3lqb by Molmil
Crystal structure of the hatching enzyme ZHE1 from the zebrafish Danio rerio
分子名称: 1,2-ETHANEDIOL, LOC792177 protein, SULFATE ION, ...
著者Tanokura, M, Okada, A, Nagata, K, Yasumasu, S, Ohtsuka, J, Iuchi, I.
登録日2010-02-08
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure of zebrafish hatching enzyme 1 from the zebrafish Danio rerio
J.Mol.Biol., 402, 2010
3LQ0
DownloadVisualize
BU of 3lq0 by Molmil
Zymogen structure of crayfish astacin metallopeptidase
分子名称: GLYCEROL, ProAstacin, SULFATE ION, ...
著者Guevara, T, Yiallouros, I, Kappelhoff, R, Bissdorf, S, Stocker, W, Gomis-Ruth, F.X.
登録日2010-02-08
公開日2010-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Proenzyme structure and activation of astacin metallopeptidase
J.Biol.Chem., 285, 2010
3EDI
DownloadVisualize
BU of 3edi by Molmil
Crystal structure of tolloid-like protease 1 (TLL-1) protease domain
分子名称: ACETYL GROUP, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Mac Sweeney, A.
登録日2008-09-03
公開日2008-09-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for the substrate specificity of bone morphogenetic protein 1/tolloid-like metalloproteases
To be Published

 

12>

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon