Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7S68
DownloadVisualize
BU of 7s68 by Molmil
Structure of human PARP1 domains (Zn1, Zn3, WGR and HD) bound to a DNA double strand break.
Descriptor: DNA (5'-D(*GP*CP*CP*TP*GP*CP*AP*GP*GP*C)-3'), Fusion of PARP1 zinc fingers 1 and 3 (Zn1, Zn3), ...
Authors:Rouleau-Turcotte, E, Pascal, J.M.
Deposit date:2021-09-13
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
7S6H
DownloadVisualize
BU of 7s6h by Molmil
Human PARP1 deltaV687-E688 bound to NAD+ analog EB-47 and to a DNA double strand break.
Descriptor: 1,2-ETHANEDIOL, 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, DNA (5'-D(*CP*GP*AP*CP*G)-3'), ...
Authors:Rouleau-Turcotte, E, Pascal, J.M.
Deposit date:2021-09-14
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
7S6M
DownloadVisualize
BU of 7s6m by Molmil
Human PARP1 deltaV687-E688 bound to a DNA double strand break.
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*CP*G)-3'), ...
Authors:Rouleau-Turcotte, E, Pascal, J.M.
Deposit date:2021-09-14
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
8G0H
DownloadVisualize
BU of 8g0h by Molmil
Human PARP1 deltaV687-E688 bound to UKTT5 (compound 10) and to a DNA double strand break.
Descriptor: 2-(4-{[2-(1H-benzimidazol-2-yl)ethyl]carbamoyl}phenyl)-1H-benzimidazole-7-carboxamide, DNA (5'-D(*CP*GP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*CP*G)-3'), ...
Authors:Rouleau-Turcotte, E, Pascal, J.M.
Deposit date:2023-01-31
Release date:2024-02-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Novel modifications of PARP inhibitor veliparib increase PARP1 binding to DNA breaks.
Biochem.J., 481, 2024
7S81
DownloadVisualize
BU of 7s81 by Molmil
Structure of human PARP1 domains (Zn1, Zn3, WGR, HD) bound to a DNA double strand break.
Descriptor: DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3'), Poly [ADP-ribose] polymerase 1, ZINC ION
Authors:Rouleau-Turcotte, E, Pascal, J.M.
Deposit date:2021-09-17
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
7ONS
DownloadVisualize
BU of 7ons by Molmil
PARP1 catalytic domain in complex with isoquinolone-based inhibitor (compound 16)
Descriptor: 7-[[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]methyl]-3-ethyl-1~{H}-quinolin-2-one, Poly [ADP-ribose] polymerase 1, SULFATE ION
Authors:Schimpl, M, Balazs, A, Barratt, D, Bista, M, Chuba, M, Degorce, S.L, Di Fruscia, P, Embrey, K, Ghosh, A, Gill, S, Gunnarsson, A, Hande, S, Hemsley, P, Heightman, T.D, Illuzzi, G, Lane, J, Larner, C, Leo, E, Madin, A, Martin, S, McWilliams, L, Orme, J, Pachl, F, Packer, M, Pike, A, Staniszewska, A.D, Talbot, V, Underwood, E, Varnes, G.J, Zhang, A, Zheng, X, Johannes, J.W.
Deposit date:2021-05-25
Release date:2021-09-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Discovery of 5-{4-[(7-Ethyl-6-oxo-5,6-dihydro-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD5305): A PARP1-DNA Trapper with High Selectivity for PARP1 over PARP2 and Other PARPs.
J.Med.Chem., 64, 2021
7ONT
DownloadVisualize
BU of 7ont by Molmil
PARP1 catalytic domain in complex with a selective pyridine carboxamide-based inhibitor (compound 22)
Descriptor: 5-[4-[(3-ethyl-2-oxidanylidene-1~{H}-quinolin-7-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide, Poly [ADP-ribose] polymerase 1, SULFATE ION
Authors:Schimpl, M, Balazs, A, Barratt, D, Bista, M, Chuba, M, Degorce, S.L, Di Fruscia, P, Embrey, K, Ghosh, A, Gill, S, Gunnarsson, A, Hande, S, Hemsley, P, Heightman, T.D, Illuzzi, G, Lane, J, Larner, C, Leo, E, Madin, A, Martin, S, McWilliams, L, Orme, J, Pachl, F, Packer, M.J, Pike, A, Staniszewska, A.D, Talbot, V, Underwood, E, Varnes, G.J, Zhang, A, Zheng, X, Johannes, J.W.
Deposit date:2021-05-25
Release date:2021-09-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Discovery of 5-{4-[(7-Ethyl-6-oxo-5,6-dihydro-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD5305): A PARP1-DNA Trapper with High Selectivity for PARP1 over PARP2 and Other PARPs.
J.Med.Chem., 64, 2021
7ONR
DownloadVisualize
BU of 7onr by Molmil
PARP1 catalytic domain in complex with 8-chloroquinazolinone-based inhibitor (compound 9)
Descriptor: 8-chloranyl-2-[3-[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]propyl]-3~{H}-quinazolin-4-one, Poly [ADP-ribose] polymerase 1, SULFATE ION
Authors:Schimpl, M, Balazs, A, Barratt, D, Bista, M, Chuba, M, Degorce, S.L, Di Fruscia, P, Embrey, K, Ghosh, A, Gill, S, Gunnarsson, A, Hande, S, Hemsley, P, Illuzzi, G, Lane, J, Larner, C, Leo, E, Madin, A, Martin, S, McWilliams, L, Orme, J, Pachl, F, Packer, M, Pike, A, Staniszewska, A.D, Talbot, V, Underwood, E, Varnes, G.J, Zhang, A, Zheng, X, Johannes, J.W.
Deposit date:2021-05-25
Release date:2021-09-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery of 5-{4-[(7-Ethyl-6-oxo-5,6-dihydro-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD5305): A PARP1-DNA Trapper with High Selectivity for PARP1 over PARP2 and Other PARPs.
J.Med.Chem., 64, 2021
6RY4
DownloadVisualize
BU of 6ry4 by Molmil
PARP15 catalytic domain in complex with 4-(3-carbamoylphenoxy)benzamide.
Descriptor: 3-(4-aminocarbonylphenoxy)benzamide, DIMETHYL SULFOXIDE, Protein mono-ADP-ribosyltransferase PARP15
Authors:Murthy, S.N, Maksimainen, M.M, Lehtio, L.
Deposit date:2019-06-10
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evaluation of 3- and 4-Phenoxybenzamides as Selective Inhibitors of the Mono-ADP-Ribosyltransferase PARP10.
Chemistryopen, 2021
7PWL
DownloadVisualize
BU of 7pwl by Molmil
PARP15 catalytic domain in complex with OUL218
Descriptor: 4-(1,3-thiazol-5-ylmethoxy)benzamide, DIMETHYL SULFOXIDE, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Murthy, S, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWS
DownloadVisualize
BU of 7pws by Molmil
PARP15 catalytic domain in complex with OUL255
Descriptor: 6-(cyclobutylmethoxy)phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWC
DownloadVisualize
BU of 7pwc by Molmil
PARP15 catalytic domain in complex with OUL238
Descriptor: 4-(cyclobutylmethoxy)benzamide, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-06
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PX6
DownloadVisualize
BU of 7px6 by Molmil
PARP15 catalytic domain in complex with OUL241
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-[(2-fluorophenyl)methoxy]phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-08
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWR
DownloadVisualize
BU of 7pwr by Molmil
PARP15 catalytic domain in complex with OUL254
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-(cyclopentylmethoxy)phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWU
DownloadVisualize
BU of 7pwu by Molmil
PARP15 catalytic domain in complex with OUL256
Descriptor: 6-(cyclopropylmethoxy)phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWA
DownloadVisualize
BU of 7pwa by Molmil
PARP15 catalytic domain in complex with OUL237
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(cyclopentylmethoxy)benzamide, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-06
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWM
DownloadVisualize
BU of 7pwm by Molmil
PARP15 catalytic domain in complex with OUL252
Descriptor: 4-(cyclohexylmethoxy)-2-methoxy-benzamide, DIMETHYL SULFOXIDE, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PX7
DownloadVisualize
BU of 7px7 by Molmil
PARP15 catalytic domain in complex with OUL242
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-(thiophen-2-ylmethoxy)phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-08
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PW3
DownloadVisualize
BU of 7pw3 by Molmil
PARP15 catalytic domain in complex with OUL217
Descriptor: 4-(cyclohexylmethoxy)benzamide, DIMETHYL SULFOXIDE, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Murthy, S, Lehtio, L.
Deposit date:2021-10-06
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWP
DownloadVisualize
BU of 7pwp by Molmil
PARP15 catalytic domain in complex with OUL221
Descriptor: 4-[(3-bromophenyl)methoxy]-2-methoxy-benzamide, DIMETHYL SULFOXIDE, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Murthy, S, Nizi, M.G, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWQ
DownloadVisualize
BU of 7pwq by Molmil
PARP15 catalytic domain in complex with OUL240
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-(cyclohexylmethoxy)phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWK
DownloadVisualize
BU of 7pwk by Molmil
PARP15 catalytic domain in complex with OUL239
Descriptor: 4-(cyclopropylmethoxy)benzamide, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7PWW
DownloadVisualize
BU of 7pww by Molmil
PARP15 catalytic domain in complex with OUL224
Descriptor: 6-[(3-bromophenyl)methoxy]phthalazine-1,4-dione, Protein mono-ADP-ribosyltransferase PARP15
Authors:Maksimainen, M.M, Murthy, S, Nizi, M.G, Lehtio, L.
Deposit date:2021-10-07
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Potent 2,3-dihydrophthalazine-1,4-dione derivatives as dual inhibitors for mono-ADP-ribosyltransferases PARP10 and PARP15.
Eur.J.Med.Chem., 237, 2022
7L9Y
DownloadVisualize
BU of 7l9y by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with RBN012042
Descriptor: 1,2-ETHANEDIOL, 7-(cyclopentylamino)-5-fluoro-2-{[(piperidin-4-yl)sulfanyl]methyl}quinazolin-4(3H)-one, CHLORIDE ION, ...
Authors:Dorsey, B.W, Swinger, K.K, Schenkel, L.B, Church, W.D, Perl, N.R, Vasbinder, M.M, Wigle, T.J, Kuntz, K.W.
Deposit date:2021-01-05
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Targeted Degradation of PARP14 Using a Heterobifunctional Small Molecule.
Chembiochem, 22, 2021
7LUN
DownloadVisualize
BU of 7lun by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with RBN011980
Descriptor: 7-(cyclopentylamino)-5-fluoro-2-{[(trans-4-hydroxycyclohexyl)sulfanyl]methyl}quinazolin-4(3H)-one, CHLORIDE ION, GLYCEROL, ...
Authors:Dorsey, B.W, Swinger, K.K, Schenkel, L.B, Church, W.D, Perl, N.R, Vasbinder, M.M, Wigle, T.J, Kuntz, K.W.
Deposit date:2021-02-22
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Targeted Degradation of PARP14 Using a Heterobifunctional Small Molecule.
Chembiochem, 22, 2021

219140

數據於2024-05-01公開中

PDB statisticsPDBj update infoContact PDBjnumon