Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LU9
DownloadVisualize
BU of 6lu9 by Molmil
Rat ionotropic Glutamate Delta-2 receptor in complex with 7-CKA and Calcium
Descriptor: Glutamate receptor ionotropic, delta-2
Authors:Kumar, J, Burada, A.P.
Deposit date:2020-01-27
Release date:2020-06-17
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The architecture of GluD2 ionotropic delta glutamate receptor elucidated by cryo-EM.
J.Struct.Biol., 211, 2020
1ISJ
DownloadVisualize
BU of 1isj by Molmil
Crystal Structure Analysis of BST-1/CD157 complexed with NMN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, bone marrow stromal cell antigen 1
Authors:Yamamoto-Katayama, S, Ariyoshi, M, Ishihara, K, Hirano, T, Jingami, H, Morikawa, K.
Deposit date:2001-12-05
Release date:2002-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities.
J.Mol.Biol., 316, 2002
3KBS
DownloadVisualize
BU of 3kbs by Molmil
Room Temperature X-ray structure of D-Xylose Isomerase in complex with 2Cd(2+) co-factors
Descriptor: CADMIUM ION, Xylose isomerase
Authors:Kovalevsky, A.Y, Hanson, L, Langan, P.
Deposit date:2009-10-20
Release date:2010-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study.
Structure, 18, 2010
3KBV
DownloadVisualize
BU of 3kbv by Molmil
Room temperature structure of D-Xylose Isomerase in complex with 2Ni(2+) co-factors
Descriptor: NICKEL (II) ION, Xylose isomerase
Authors:Kovalevsky, A.Y, Hanson, L, Langan, P.
Deposit date:2009-10-20
Release date:2010-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study.
Structure, 18, 2010
6C5X
DownloadVisualize
BU of 6c5x by Molmil
Crystal Structure of SOCS1 in complex with ElonginB and ElonginC
Descriptor: Elongin-B, Elongin-C, GP130 peptide fragment, ...
Authors:Kershaw, N.J, Laktyushin, A, Babon, J.J.
Deposit date:2018-01-17
Release date:2018-05-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.105 Å)
Cite:The molecular basis of JAK/STAT inhibition by SOCS1.
Nat Commun, 9, 2018
3CXO
DownloadVisualize
BU of 3cxo by Molmil
Crystal structure of L-rhamnonate dehydratase from Salmonella typhimurium complexed with Mg and 3-deoxy-L-rhamnonate
Descriptor: (2R,4S)-2,4,7-trihydroxyheptanoic acid, 3,6-dideoxy-L-arabino-hexonic acid, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Hubbard, B.K, Gerlt, J.A, Almo, S.C.
Deposit date:2008-04-24
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: L-rhamnonate dehydratase.
Biochemistry, 47, 2008
1CM7
DownloadVisualize
BU of 1cm7 by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE FROM ESCHERICHIA COLI
Descriptor: PROTEIN (3-ISOPROPYLMALATE DEHYDROGENASE)
Authors:Wallon, G, Kryger, G, Lovett, S.T, Oshima, T, Ringe, D, Petsko, G.A.
Deposit date:1999-05-17
Release date:1999-07-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structures of Escherichia coli and Salmonella typhimurium 3-isopropylmalate dehydrogenase and comparison with their thermophilic counterpart from Thermus thermophilus.
J.Mol.Biol., 266, 1997
2ANP
DownloadVisualize
BU of 2anp by Molmil
Functional Glutamate 151 to Histidine mutant of the aminopeptidase from Aeromonas Proteolytica.
Descriptor: SODIUM ION, ZINC ION, leucyl aminopeptidase
Authors:Bzymek, K.P, Moulin, A, Swierczek, S.I, Ringe, D, Petsko, G.A, Holz, R.C.
Deposit date:2005-08-11
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Kinetic, Spectroscopic, and X-ray Crystallographic Characterization of the Functional E151H Aminopeptidase from Aeromonas proteolytica.
Biochemistry, 44, 2005
1TG5
DownloadVisualize
BU of 1tg5 by Molmil
Crystal structures of plant 4-hydroxyphenylpyruvate dioxygenases complexed with DAS645
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (II) ION, [1-TERT-BUTYL-3-(2,4-DICHLOROPHENYL)-5-HYDROXY-1H-PYRAZOL-4-YL][2-CHLORO-4-(METHYLSULFONYL)PHENYL]METHANONE
Authors:Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
Deposit date:2004-05-28
Release date:2004-08-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
1FXT
DownloadVisualize
BU of 1fxt by Molmil
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX
Descriptor: UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2-24 KDA
Authors:Hamilton, K.S, Shaw, G.S, Williams, R.S, Huzil, J.T, McKenna, S, Ptak, C, Glover, M, Ellison, M.J.
Deposit date:2000-09-26
Release date:2001-10-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.
Structure, 9, 2001
3TRB
DownloadVisualize
BU of 3trb by Molmil
Structure of an addiction module antidote protein of a HigA (higA) family from Coxiella burnetii
Descriptor: Virulence-associated protein I
Authors:Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
5VAD
DownloadVisualize
BU of 5vad by Molmil
Crystal structure of human Prolyl-tRNA synthetase (PRS) in complex with inhibitor
Descriptor: 3-[(cyclohexanecarbonyl)amino]-N-(2,3-dihydro-1H-inden-2-yl)pyrazine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, PROLINE, ...
Authors:Okada, K, Skene, R.J.
Deposit date:2017-03-24
Release date:2017-05-31
Last modified:2017-06-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Discovery of a novel prolyl-tRNA synthetase inhibitor and elucidation of its binding mode to the ATP site in complex with l-proline.
Biochem. Biophys. Res. Commun., 488, 2017
5V59
DownloadVisualize
BU of 5v59 by Molmil
Crystal structure of catalytic fragment of human AlaRS in complex with Aze-SA
Descriptor: 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine, Alanine--tRNA ligase, cytoplasmic
Authors:Zhou, H, Song, Y, Schimmel, P.
Deposit date:2017-03-13
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
Nat Commun, 8, 2017
2F21
DownloadVisualize
BU of 2f21 by Molmil
human Pin1 Fip mutant
Descriptor: PENTAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Jager, M, Zhang, Y, Bowman, M.E, Noel, J.P, Kelly, J.W.
Deposit date:2005-11-15
Release date:2006-06-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-function-folding relationship in a WW domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5FTI
DownloadVisualize
BU of 5fti by Molmil
Crystal structure of the GluA2 K738M-T744K LBD in complex with glutamate (lithium form)
Descriptor: GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, GLYCEROL, ...
Authors:Nayeem, N, Green, T.
Deposit date:2016-01-13
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Distinct Structural Pathways Coordinate the Activation of Ampa Receptor-Auxiliary Subunit Complexes.
Neuron, 89, 2016
2BUE
DownloadVisualize
BU of 2bue by Molmil
Structure of AAC(6')-Ib in complex with Ribostamycin and Coenzyme A.
Descriptor: AAC(6')-IB, CALCIUM ION, COENZYME A, ...
Authors:Vetting, M.W, Park, C.H, Hedge, S.S, Hooper, D.C, Blanchard, J.S.
Deposit date:2008-03-20
Release date:2008-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanistic and Structural Analysis of Aminoglycoside N-Acetyltransferase Aac(6')-Ib and its Bifunctional, Fluoroquinolone-Active Aac(6')-Ib-Cr Variant.
Biochemistry, 47, 2008
5OKR
DownloadVisualize
BU of 5okr by Molmil
Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-glucose
Descriptor: 6-O-phosphono-beta-D-glucopyranose, GLYCEROL, IMIDAZOLE, ...
Authors:Lansky, S, Zehavi, A, Shoham, Y, Shoham, G.
Deposit date:2017-07-25
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for enzyme bifunctionality - the case of Gan1D from Geobacillus stearothermophilus.
FEBS J., 284, 2017
7Z6S
DownloadVisualize
BU of 7z6s by Molmil
MATCAP bound to a human 14 protofilament microtubule
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Bak, J, Perrakis, A.
Deposit date:2022-03-14
Release date:2022-05-11
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Posttranslational modification of microtubules by the MATCAP detyrosinase.
Science, 376, 2022
2UVG
DownloadVisualize
BU of 2uvg by Molmil
Structure of a periplasmic oligogalacturonide binding protein from Yersinia enterocolitica
Descriptor: ABC TYPE PERIPLASMIC SUGAR-BINDING PROTEIN
Authors:Abbott, D.W, Boraston, A.B.
Deposit date:2007-03-10
Release date:2007-05-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Specific Recognition of Saturated and 4,5-Unsaturated Hexuronate Sugars by a Periplasmic Binding Protein Involved in Pectin Catabolism.
J.Mol.Biol., 369, 2007
5I59
DownloadVisualize
BU of 5i59 by Molmil
Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains with MPX 007
Descriptor: 5-({[(3,4-difluorophenyl)sulfonyl]amino}methyl)-6-methyl-N-[(2-methyl-4H-1lambda~4~,3-thiazol-5-yl)methyl]pyrazine-2-carboxamide, GLUTAMIC ACID, GLYCINE, ...
Authors:Mou, T.-C, Sprang, S.R, Hansen, K.B.
Deposit date:2016-02-14
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for Negative Allosteric Modulation of GluN2A-Containing NMDA Receptors.
Neuron, 91, 2016
1ISI
DownloadVisualize
BU of 1isi by Molmil
Crystal Structure Analysis of BST-1/CD157 complexed with ethenoNAD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICOTINAMIDE, [[(2R,3S,4R,5R)-3,4-dihydroxy-5-(9H-imidazo[2,1-f]purin-6-ium-3-yl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-3,4-dihydroxy-5-oxidanidyl-oxolan-2-yl]methyl phosphate, ...
Authors:Yamamoto-Katayama, S, Ariyoshi, M, Ishihara, K, Hirano, T, Jingami, H, Morikawa, K.
Deposit date:2001-12-05
Release date:2002-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities.
J.Mol.Biol., 316, 2002
3ZZM
DownloadVisualize
BU of 3zzm by Molmil
Crystal structure of Mycobacterium tuberculosis PurH with a novel bound nucleotide CFAIR, at 2.2 A resolution.
Descriptor: 5-(FORMYLAMINO)-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, GLYCEROL, ...
Authors:Le Nours, J, Bulloch, E.M.M, Zhang, Z, Greenwood, D.R, Middleditch, M.J, Dickson, J.M.J, Baker, E.N.
Deposit date:2011-09-02
Release date:2011-09-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Analyses of a Purine Biosynthetic Enzyme from Mycobacterium Tuberculosis Reveal a Novel Bound Nucleotide.
J.Biol.Chem., 286, 2011
1EWM
DownloadVisualize
BU of 1ewm by Molmil
THE CYSTEINE PROTEASE CRUZAIN BOUND TO WRR-112
Descriptor: CRUZAIN, N-[3-CARBOXY-2-HYDROXY-PROPIONYL]-L-HOMOPHENYLALANYL-AMINO-2-METHYLBUTANE
Authors:Brinen, L.S, Gillmor, S.A, Fletterick, R.J.
Deposit date:2000-04-26
Release date:2003-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Cruzain bound to WRR-112
To be Published
1MMX
DownloadVisualize
BU of 1mmx by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-fucose
Descriptor: Aldose 1-epimerase, SODIUM ION, alpha-L-fucopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
1MMZ
DownloadVisualize
BU of 1mmz by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis complexed with L-arabinose
Descriptor: Aldose 1-epimerase, SODIUM ION, beta-L-arabinopyranose
Authors:Thoden, J.B, Kim, J, Raushel, R.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon