Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YCD
DownloadVisualize
BU of 6ycd by Molmil
Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor
Descriptor: Ananain, GLYCEROL, N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCG
DownloadVisualize
BU of 6ycg by Molmil
Structure the bromelain protease from Ananas comosus in complex with the TLCK inhibitor
Descriptor: CITRIC ACID, FBSB, ISOPROPYL ALCOHOL, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6YCC
DownloadVisualize
BU of 6ycc by Molmil
Structure the ananain protease from Ananas comosus covalently bound to the E64 inhibitor
Descriptor: Ananain, GLYCEROL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
7KM4
DownloadVisualize
BU of 7km4 by Molmil
Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein
Descriptor: Green fluorescent protein
Authors:Nguyen, T, Nicely, N.I, McCafferty, D.G.
Deposit date:2020-11-02
Release date:2021-11-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein
To be Published
5XZG
DownloadVisualize
BU of 5xzg by Molmil
Mouse cGAS bound to the inhibitor RU521
Descriptor: 2-(4,5-dichloro-1H-benzimidazol-2-yl)-5-methyl-4-[(1R)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-1,2-dihydro-3H-pyrazol-3-one, Cyclic GMP-AMP synthase, DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)-3'), ...
Authors:Vincent, J, Adura, C, Gao, P, Luz, A, Lama, L, Asano, Y, Okamoto, R, Imaeda, T, Aida, J, Rothamel, K, Gogakos, T, Steinberg, J, Reasoner, S, Aso, K, Tuschl, T, Patel, D.J, Glickman, J.F, Ascano, M.
Deposit date:2017-07-12
Release date:2017-10-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.828 Å)
Cite:Small molecule inhibition of cGAS reduces interferon expression in primary macrophages from autoimmune mice.
Nat Commun, 8, 2017
7W82
DownloadVisualize
BU of 7w82 by Molmil
Crystal structure of maize RDR2
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W88
DownloadVisualize
BU of 7w88 by Molmil
CryoEM structure of open form ZmRDR2 at 3.5 Angstroms resolution
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W84
DownloadVisualize
BU of 7w84 by Molmil
CryoEM structure of apo form ZmRDR2 at 3.4 Angstroms resolution
Descriptor: RNA-dependent RNA polymerase
Authors:Du, X, Yang, Z, Du, J.
Deposit date:2021-12-07
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
3L8E
DownloadVisualize
BU of 3l8e by Molmil
Crystal Structure of apo form of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli
Descriptor: ACETIC ACID, D,D-heptose 1,7-bisphosphate phosphatase, ZINC ION
Authors:Nguyen, H, Peisach, E, Allen, K.N.
Deposit date:2009-12-31
Release date:2010-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural Determinants of Substrate Recognition in the HAD Superfamily Member d-glycero-d-manno-Heptose-1,7-bisphosphate Phosphatase (GmhB) .
Biochemistry, 49, 2010
3GPM
DownloadVisualize
BU of 3gpm by Molmil
Structure of the trimeric form of the E113G PCNA mutant protein
Descriptor: Proliferating cell nuclear antigen
Authors:Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T.
Deposit date:2009-03-23
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A charged residue at the subunit interface of PCNA promotes trimer formation by destabilizing alternate subunit interactions.
Acta Crystallogr.,Sect.D, 65, 2009
5XZB
DownloadVisualize
BU of 5xzb by Molmil
Mouse cGAS bound to the inhibitor RU365
Descriptor: (3R)-3-[1-(1H-benzimidazol-2-yl)-5-hydroxy-3-methyl-1H-pyrazol-4-yl]-2-benzofuran-1(3H)-one, Cyclic GMP-AMP synthase, DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)-3'), ...
Authors:Vincent, J, Adura, C, Gao, P, Luz, A, Lama, L, Asano, Y, Okamoto, R, Imaeda, T, Aida, J, Rothamel, K, Gogakos, T, Steinberg, J, Reasoner, S, Aso, K, Tuschl, T, Patel, D.J, Glickman, J.F, Ascano, M.
Deposit date:2017-07-12
Release date:2017-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Small molecule inhibition of cGAS reduces interferon expression in primary macrophages from autoimmune mice.
Nat Commun, 8, 2017
6H35
DownloadVisualize
BU of 6h35 by Molmil
Myxococcus xanthus MglA bound to GDP and Pi with mixed inactive and active switch region conformations
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, Mutual gliding-motility protein MglA, ...
Authors:Varela, P.F, Galicia, C, Cherfils, J.
Deposit date:2018-07-17
Release date:2019-12-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MglA functions as a three-state GTPase to control movement reversals of Myxococcus xanthus.
Nat Commun, 10, 2019
3L8F
DownloadVisualize
BU of 3l8f by Molmil
Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli complexed with magnesium and phosphate
Descriptor: D,D-heptose 1,7-bisphosphate phosphatase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Nguyen, H, Peisach, E, Allen, K.N.
Deposit date:2009-12-31
Release date:2010-02-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Determinants of Substrate Recognition in the HAD Superfamily Member d-glycero-d-manno-Heptose-1,7-bisphosphate Phosphatase (GmhB) .
Biochemistry, 49, 2010
5HGR
DownloadVisualize
BU of 5hgr by Molmil
Structure of Anabaena (Nostoc) sp. PCC 7120 Orange Carotenoid Protein binding canthaxanthin
Descriptor: Orange Carotenoid Protein (OCP), beta,beta-carotene-4,4'-dione
Authors:Sutter, M, Leverenz, R.L, Kerfeld, C.A.
Deposit date:2016-01-08
Release date:2016-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.681 Å)
Cite:Different Functions of the Paralogs to the N-Terminal Domain of the Orange Carotenoid Protein in the Cyanobacterium Anabaena sp. PCC 7120.
Plant Physiol., 171, 2016
5Z8S
DownloadVisualize
BU of 5z8s by Molmil
Human Mitochondrial ferritin mutant - C102A/C130A/E27C/E61C/E62C
Descriptor: Ferritin, mitochondrial, GOLD ION
Authors:Zang, J, Zheng, B, Zhao, G.
Deposit date:2018-02-01
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.973 Å)
Cite:Design and site-directed compartmentalization of gold nanoclusters within the intrasubunit interfaces of ferritin nanocage.
J Nanobiotechnology, 17, 2019
5Z91
DownloadVisualize
BU of 5z91 by Molmil
Human mitochondrial ferritin mutant bound with gold ions
Descriptor: Ferritin, mitochondrial, GOLD ION, ...
Authors:Zang, J, Zheng, B, Zhao, G.
Deposit date:2018-02-01
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Design and site-directed compartmentalization of gold nanoclusters within the intrasubunit interfaces of ferritin nanocage.
J Nanobiotechnology, 17, 2019
5Z8U
DownloadVisualize
BU of 5z8u by Molmil
Human mitochondrial ferritin mutant - C102A/C130A
Descriptor: Ferritin, mitochondrial, MAGNESIUM ION
Authors:Zang, J, Zheng, B, Zhao, G.
Deposit date:2018-02-01
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design and site-directed compartmentalization of gold nanoclusters within the intrasubunit interfaces of ferritin nanocage.
J Nanobiotechnology, 17, 2019
6H5B
DownloadVisualize
BU of 6h5b by Molmil
Myxococcus xanthus MglA in complex with its GAP MglB and GTPgammaS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Galicia, C, Cherfils, J.
Deposit date:2018-07-24
Release date:2019-11-27
Last modified:2020-11-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:MglA functions as a three-state GTPase to control movement reversals of Myxococcus xanthus.
Nat Commun, 10, 2019
5Z8J
DownloadVisualize
BU of 5z8j by Molmil
Human mitochondrial ferritin mutant - E27C/E62C/C102G/C130G
Descriptor: Ferritin, mitochondrial, GOLD ION
Authors:Zang, J, Zheng, B, Zhao, G.
Deposit date:2018-01-31
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design and site-directed compartmentalization of gold nanoclusters within the intrasubunit interfaces of ferritin nanocage.
J Nanobiotechnology, 17, 2019
6HJH
DownloadVisualize
BU of 6hjh by Molmil
Myxococcus xanthus MglA bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mutual gliding-motility protein MglA
Authors:Varela, P.F, Cherfils, J.
Deposit date:2018-09-03
Release date:2019-12-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:MglA functions as a three-state GTPase to control movement reversals of Myxococcus xanthus.
Nat Commun, 10, 2019
5KV9
DownloadVisualize
BU of 5kv9 by Molmil
Crystal structure of a hPIV haemagglutinin-neuraminidase-inhibitor complex
Descriptor: 1,2-ETHANEDIOL, 2,6-anhydro-3,4,5-trideoxy-5-[(2-methylpropanoyl)amino]-4-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-en onic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dirr, L, El-Deeb, I.M, Chavas, L.M.G, Guillon, P, von Itzstein, M.
Deposit date:2016-07-13
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The impact of the butterfly effect on human parainfluenza virus haemagglutinin-neuraminidase inhibitor design.
Sci Rep, 7, 2017
8SLQ
DownloadVisualize
BU of 8slq by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-3
Descriptor: Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-24
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLE
DownloadVisualize
BU of 8sle by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-3
Descriptor: Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-21
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLI
DownloadVisualize
BU of 8sli by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-1
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-21
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
7LHQ
DownloadVisualize
BU of 7lhq by Molmil
Solution structure of SARS-CoV-2 nonstructural protein 7 at pH 7.0
Descriptor: Non-structural protein 7
Authors:Lee, Y, Tonelli, M, Anderson, T.K, Kirchdoerfer, R.N, Henzler-Wildman, K, Lee, W.
Deposit date:2021-01-26
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:pH-dependent polymorphism of the structure of SARS-CoV-2 nsp7
Biorxiv, 2021

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon