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6QYC
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BU of 6qyc by Molmil
Crystal structure of MtrC from Shewanella baltica OS185
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Decaheme c-type cytochrome, ...
Authors:Clarke, T.A, Edwards, M.J.
Deposit date:2019-03-08
Release date:2020-04-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The Crystal Structure of a Biological Insulated Transmembrane Molecular Wire.
Cell, 181, 2020
8PC4
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BU of 8pc4 by Molmil
MEMBRANE TARGET COMPLEX 1
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 6-chloro-3,4-dihydro-2H-1,2,4-benzothiadiazine-7-sulfonamide 1,1-dioxide, ...
Authors:Garau, G.
Deposit date:2023-06-09
Release date:2024-06-26
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:NAPE-PLD is target of thiazide diuretics.
Cell Chem Biol, 32, 2025
8SMP
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BU of 8smp by Molmil
Xenopus laevis hyaluronan synthase 1, UDP-bound, gating loop inserted state
Descriptor: Fab15 heavy chain, Fab15 light chain, Hyaluronan synthase 1, ...
Authors:Gorniak, I, Zimmer, J.
Deposit date:2023-04-26
Release date:2024-05-01
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into translocation and tailored synthesis of hyaluronan.
Nat.Struct.Mol.Biol., 32, 2025
6OT1
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BU of 6ot1 by Molmil
Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122
Descriptor: 0PV-b.01 heavy, 0PV-b.01 light, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2019-05-02
Release date:2019-08-07
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
8DOC
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BU of 8doc by Molmil
Crystal structure of RPE65 in complex with compound 16e and palmitate
Descriptor: (1R)-1-[3-(cyclohexylmethoxy)phenyl]-3-(methylamino)propan-1-ol, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FE (II) ION, ...
Authors:Bassetto, M, Kiser, P.D.
Deposit date:2022-07-12
Release date:2023-05-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tuning the Metabolic Stability of Visual Cycle Modulators through Modification of an RPE65 Recognition Motif.
J.Med.Chem., 66, 2023
9B2P
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BU of 9b2p by Molmil
Structure of the quorum quenching lactonase GcL D122N mutant - bimetallic metal center - C2 space group
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, FE (III) ION, ...
Authors:Corbella, M, Bravo, J.A, Demkiv, A.O, Calixto, A.R, Sompiyachoke, K, Bergonzi, C, Kamerlin, S.C.L, Elias, M.
Deposit date:2024-03-15
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Catalytic Redundancies and Conformational Plasticity Drives Selectivity and Promiscuity in Quorum Quenching Lactonases.
Jacs Au, 4, 2024
7NBD
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BU of 7nbd by Molmil
Crystal structure of human serine racemase in complex with DSiP fragment Z235449082, XChem fragment screen.
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Koulouris, C.R, Roe, S.M.
Deposit date:2021-01-26
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.865 Å)
Cite:Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.
Commun Biol, 5, 2022
3IF6
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BU of 3if6 by Molmil
Crystal structure of OXA-46 beta-lactamase from P. aeruginosa
Descriptor: 1,2-ETHANEDIOL, HEXAETHYLENE GLYCOL, L(+)-TARTARIC ACID, ...
Authors:Docquier, J.D, Benvenuti, M, Calderone, V, Giuliani, F, Kapetis, D, De Luca, F, Rossolini, G.M, Mangani, S.
Deposit date:2009-07-24
Release date:2010-03-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the narrow-spectrum OXA-46 class D beta-lactamase: relationship between active-site lysine carbamylation and inhibition by polycarboxylates
Antimicrob.Agents Chemother., 54, 2010
7NQ8
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BU of 7nq8 by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide
Authors:Chung, C.W.
Deposit date:2021-03-01
Release date:2021-03-24
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors.
J.Med.Chem., 64, 2021
7RJP
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BU of 7rjp by Molmil
Crystal structure of human Bromodomain containing protein 4 (BRD4) in complex with SHMT
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, CHLORIDE ION, ...
Authors:Fedorov, E, Islam, K, Ghosh, A.
Deposit date:2021-07-21
Release date:2022-08-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Uncovering the Bromodomain Interactome using Site-Specific Azide-Acetyllysine Photochemistry, Proteomic Profiling and Structural Characterization
To Be Published
7NQI
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BU of 7nqi by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 2-benzyl-N-cyclopropyl-6-(1-methyl-1H-1,2,3-triazol-4-yl)isonicotinamide
Descriptor: 1,2-ETHANEDIOL, 2-benzyl-N-cyclopropyl-6-(1-methyl-1H-1,2,3-triazol-4-yl)isonicotinamide, Bromodomain-containing protein 2
Authors:Chung, C.W.
Deposit date:2021-03-01
Release date:2021-03-24
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors.
J.Med.Chem., 64, 2021
8IMR
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BU of 8imr by Molmil
Structure of ligand-free human macrophage migration inhibitory factor
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, ...
Authors:Sugishima, K, Noguchi, K, Yohda, M, Odaka, M, Matsumura, H.
Deposit date:2023-03-07
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Identification of methotrexate as an inhibitor of macrophage migration inhibitory factor by high-resolution crystal structure analysis
To Be Published
6B1Z
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BU of 6b1z by Molmil
Crystal Structure of Glutamate-tRNA Synthetase from Elizabethkingia anophelis
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Glutamate--tRNA ligase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-09-19
Release date:2017-10-04
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of glutamyl-tRNA synthetase from Elizabethkingia anopheles and E. meningosepticum.
Acta Crystallogr.,Sect.F, 78, 2022
5NHS
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BU of 5nhs by Molmil
The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD)
Descriptor: 1,2-ETHANEDIOL, Bifunctional protein FolD
Authors:Bueno, R.V, Guido, R.V.C, Maluf, F.V, Lima, G.M.A, Oliveira, A.A.
Deposit date:2017-03-22
Release date:2018-05-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD)
To Be Published
8IYM
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BU of 8iym by Molmil
Crystal structure of a protein acetyltransferase, HP0935
Descriptor: 1,2-ETHANEDIOL, N-acetyltransferase domain-containing protein, POTASSIUM ION, ...
Authors:Dadireddy, V, Mahanta, P, Kumar, A, Desirazu, R.N, Ramakumar, S.
Deposit date:2023-04-05
Release date:2024-04-10
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural characterization of a GNAT superfamily protein acetyltransferase from Helicobacter pylori.
J.Biol.Chem., 301, 2025
5A61
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BU of 5a61 by Molmil
Crystal structure of full-length E. coli ygiF in complex with tripolyphosphate and two manganese ions.
Descriptor: 1,2-ETHANEDIOL, INORGANIC TRIPHOSPHATASE, MANGANESE (II) ION, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
8AVT
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BU of 8avt by Molmil
Racemic protein crystal structure of aureocin A53 from Staphylococcus aureus in the presence of glycerol 3-phosphate
Descriptor: 1,2-ETHANEDIOL, Bacteriocin aureocin A53, D-Aureocin A53, ...
Authors:Lander, A.J, Baumann, P, Rizkallah, P, Jin, Y, Luk, L.Y.P.
Deposit date:2022-08-26
Release date:2023-07-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography.
Commun Chem, 6, 2023
9EWT
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BU of 9ewt by Molmil
Optimisation of Potent, Efficacious, Selective and Blood-Brain Barrier Penetrating Inhibitors Targeting EGFR Exon20 Insertion Mutations
Descriptor: 1-[2-[3-[(E)-2-(5-cyclopropyl-1,3-oxazol-2-yl)ethenyl]phenyl]-3-pyridin-4-yl-4,6-dihydropyrrolo[3,4-d]imidazol-5-yl]propan-1-one, Epidermal growth factor receptor
Authors:Hargreaves, D.
Deposit date:2024-04-04
Release date:2024-10-16
Method:X-RAY DIFFRACTION (3.019 Å)
Cite:Optimization of Potent, Efficacious, Selective and Blood-Brain Barrier Penetrating Inhibitors Targeting EGFR Exon20 Insertion Mutations.
J.Med.Chem., 2024
8AVU
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BU of 8avu by Molmil
Racemic protein crystal structure of aureocin A53 from Staphylococcus aureus in the dimeric state
Descriptor: 1,2-ETHANEDIOL, Bacteriocin aureocin A53, D-Aureocin A53, ...
Authors:Lander, A.J, Baumann, P, Rizkallah, P, Jin, Y, Luk, L.Y.P.
Deposit date:2022-08-26
Release date:2023-07-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography.
Commun Chem, 6, 2023
9EVO
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BU of 9evo by Molmil
Plasmodium falciparum apical membrane antigen 3D7
Descriptor: Apical membrane antigen 1
Authors:Bentley, G.A, Saul, F.A, Vulliez-Le Normand, B.
Deposit date:2024-03-31
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational variability in the D2 loop of Plasmodium Apical Membrane antigen 1.
J Struct Biol X, 10, 2024
7NNG
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BU of 7nng by Molmil
Crystal structure of the SARS-CoV-2 helicase in complex with Z2327226104
Descriptor: 1-(2-methylphenyl)-1,2,3-triazole-4-carboxylic acid, PHOSPHATE ION, SARS-CoV-2 helicase NSP13, ...
Authors:Newman, J.A, Yosaatmadja, Y, Douangamath, A, Bountra, C, Gileadi, O.
Deposit date:2021-02-24
Release date:2021-04-07
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase.
Nat Commun, 12, 2021
9IQW
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BU of 9iqw by Molmil
phage HY126 encoded D-arabinose 1,5-diphosphate phosphatase AfhF
Descriptor: Capsule biosynthesis protein, GLYCEROL, MAGNESIUM ION
Authors:Yu, H, Lianrong, W.
Deposit date:2024-07-13
Release date:2025-07-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:structure of bisphosphate phosphatase at 1.64 angstroms resolution
To Be Published
8IOG
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BU of 8iog by Molmil
Cryo-EM structure of porcine bc1 complex in isolated state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Complex III subunit 9, ...
Authors:Wang, Y.X, Dong, J.Q, Yang, G.F.
Deposit date:2023-03-11
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Cryo-EM structure of porcine bc1 complex in isolated state
To Be Published
6QF4
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BU of 6qf4 by Molmil
X-Ray structure of human Serine/Threonine Kinase 17B (STK17B) aka DRAK2 in complex with ADP obtained by on-chip soaking
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Lieske, J, Cerv, M, Kreida, S, Barthelmess, M, Fischer, P, Pakendorf, T, Yefanov, O, Mariani, V, Seine, T, Ross, B.H, Crosas, E, Lorbeer, O, Burkhardt, A, Lane, T.J, Guenther, S, Bergtholdt, J, Schoen, S, Tornroth-Horsefield, S, Chapman, H.N, Meents, A.
Deposit date:2019-01-09
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:On-chip crystallization for serial crystallography experiments and on-chip ligand-binding studies.
Iucrj, 6, 2019
1ETT
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BU of 1ett by Molmil
REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS
Descriptor: 4-[(2S)-2-{[(4-methylphenyl)sulfonyl]amino}-3-oxo-3-(piperidin-1-yl)propyl]benzene-1-carboximidamide, EPSILON-THROMBIN
Authors:Bode, W, Brandstetter, H.
Deposit date:1992-07-06
Release date:1994-01-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Refined 2.3 A X-ray crystal structure of bovine thrombin complexes formed with the benzamidine and arginine-based thrombin inhibitors NAPAP, 4-TAPAP and MQPA. A starting point for improving antithrombotics.
J.Mol.Biol., 226, 1992

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