PDB: 52540 resultsInfo pagesStatus searchChemie searchBIRD

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5WRB	Crystal structure of hen egg-white lysozyme Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Sugahara, M, Suzuki, M, Masuda, T, Inoue, S, Nango, E. Deposit date: 2016-12-01 Release date: 2017-12-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.013 Å) Cite: Hydroxyethyl cellulose matrix applied to serial crystallography Sci Rep, 7, 2017
7CHK	Cryo-EM Structure of Apple Latent Spherical Virus (ALSV) Descriptor: VP20 protein, VP24 protein, VP25 protein Authors: Naitow, H, Hamaguchi, T, Maki-Yonekura, S, Isogai, M, Yoshikawa, N, Yonekura, K. Deposit date: 2020-07-06 Release date: 2020-11-04 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (2.87 Å) Cite: Apple latent spherical virus structure with stable capsid frame supports quasi-stable protrusions expediting genome release. Commun Biol, 3, 2020
5KI5	Structural impact of single ribonucleotides in DNA Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*CP*CP*TP*G)-3') Authors: Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W. Deposit date: 2016-06-16 Release date: 2016-08-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Impact of Single Ribonucleotide Residues in DNA. Chembiochem, 17, 2016
5KIE	Structural impact of single ribonucleotides in DNA Descriptor: DNA (5'-D(*GP*AP*GP*CP*TP*CP*CP*AP*T)-3'), DNA/RNA (5'-D(*AP*TP*GP*GP*A)-R(P*G)-D(P*CP*TP*C)-3') Authors: Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W. Deposit date: 2016-06-16 Release date: 2016-08-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Impact of Single Ribonucleotide Residues in DNA. Chembiochem, 17, 2016
5KI7	Structural impact of single ribonucleotides in DNA Descriptor: DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3'), DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3') Authors: Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W. Deposit date: 2016-06-16 Release date: 2016-08-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Impact of Single Ribonucleotide Residues in DNA. Chembiochem, 17, 2016
5KIH	Structural impact of single ribonucleotides in DNA Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3') Authors: Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W. Deposit date: 2016-06-16 Release date: 2016-08-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Impact of Single Ribonucleotide Residues in DNA. Chembiochem, 17, 2016
7CRO	NSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ... Authors: Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z. Deposit date: 2020-08-14 Release date: 2020-10-21 Last modified: 2021-03-03 Method: ELECTRON MICROSCOPY (3.75 Å) Cite: Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases. Nature, 590, 2021
5ZH1	Crystal structure of NDM-1 at pH7.5 (Imidazole) with 2 molecules per asymmetric unit Descriptor: HYDROXIDE ION, IMIDAZOLE, Metallo-beta-lactamase type 2, ... Authors: Zhang, H, Hao, Q. Deposit date: 2018-03-10 Release date: 2018-08-22 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.05 Å) Cite: Active-Site Conformational Fluctuations Promote the Enzymatic Activity of NDM-1. Antimicrob. Agents Chemother., 62, 2018
5IX5	NMR structure of antibacterial factor-2 Descriptor: Antibacterial factor-related peptide 2 Authors: Masakatsu, K, Umetsu, Y, Rumi, F, Kikukawa, T, Ohki, S, Mizuguchi, M, Demura, M, Aizawa, T. Deposit date: 2016-03-23 Release date: 2017-03-29 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: NMR structure of ABF-2 (antibacterial factor-2) from C. elegans and the interaction with membrane mimetic systems To Be Published
1JM7	Solution structure of the BRCA1/BARD1 RING-domain heterodimer Descriptor: BRCA1-ASSOCIATED RING DOMAIN PROTEIN 1, BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN, ZINC ION Authors: Brzovic, P.S, Rajagopal, P, Hoyt, D.W, King, M.-C, Klevit, R.E. Deposit date: 2001-07-17 Release date: 2001-10-03 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of a BRCA1-BARD1 heterodimeric RING-RING complex. Nat.Struct.Biol., 8, 2001
5TFB	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with 7-methyl-GTP Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-24 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
5TFI	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dGTP Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-25 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.891 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
5TFA	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dUTP Descriptor: Cystic fibrosis transmembrane conductance regulator, DEOXYURIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-24 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
5TFG	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with 5-methyl-UTP Descriptor: 5-Methyluridine triphosphate, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-25 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
6TZ5	CryoEM reconstruction of membrane-bound ESCRT-III filament composed of CHMP1B+IST1 (left-handed) Descriptor: Charged multivesicular body protein 1b, IST1 homolog Authors: Nguyen, H.C, Frost, A. Deposit date: 2019-08-10 Release date: 2020-04-08 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Membrane constriction and thinning by sequential ESCRT-III polymerization. Nat.Struct.Mol.Biol., 27, 2020
5KIB	Structural impact of single ribonucleotides in DNA Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3') Authors: Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W. Deposit date: 2016-06-16 Release date: 2016-08-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Impact of Single Ribonucleotide Residues in DNA. Chembiochem, 17, 2016
5KES	Solution structure of the yeast Ddi1 HDD domain Descriptor: DNA damage-inducible protein 1 Authors: Trempe, J.-F, Ratcliffe, C, Veverka, V, Saskova, K, Gehring, K. Deposit date: 2016-06-10 Release date: 2016-10-05 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family. Sci Rep, 6, 2016
5JYT	NMR structure of foldswitch-stablized KaiB from Thermosynechococcus elongatus Descriptor: Circadian clock protein KaiB Authors: Tseng, R.D, LiWang, A.L. Deposit date: 2016-05-15 Release date: 2017-03-29 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural basis of the day-night transition in a bacterial circadian clock. Science, 355, 2017
5JOL	Calcium-free EF-hand domain of L-plastin Descriptor: Plastin-2 Authors: Ishida, H, Jensen, K.V, Woodman, A.G, Hyndman, M.E, Vogel, H.J. Deposit date: 2016-05-02 Release date: 2017-04-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The Calcium-Dependent Switch Helix of L-Plastin Regulates Actin Bundling. Sci Rep, 7, 2017
5WRA	Crystal structure of hen egg-white lysozyme Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Sugahara, M, Suzuki, M, Masuda, T, Inoue, S, Nango, E. Deposit date: 2016-12-01 Release date: 2017-12-06 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Hydroxyethyl cellulose matrix applied to serial crystallography Sci Rep, 7, 2017
1OIS	YEAST DNA TOPOISOMERASE I, N-TERMINAL FRAGMENT Descriptor: DNA TOPOISOMERASE I Authors: Lue, N, Sharma, A, Mondragon, A, Wang, J.C. Deposit date: 1996-09-14 Release date: 1997-03-12 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A 26 kDa yeast DNA topoisomerase I fragment: crystallographic structure and mechanistic implications. Structure, 3, 1995
5WXE	Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers Descriptor: jasmintide js3 Authors: Kumari, G, Wong, K.H, Serra, A, Shin, J, Yoon, H.S, Sze, S.K, James, P.T. Deposit date: 2017-01-07 Release date: 2018-01-17 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers To Be Published
5WQZ	Solution structure of a histone binding domain Descriptor: Putative uncharacterized protein Authors: Mi, J. Deposit date: 2016-11-29 Release date: 2017-01-25 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Structure Of A Histone Binding Domain To Be Published
5X50	RNA Polymerase II from Komagataella Pastoris (Type-2 crystal) Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... Authors: Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. Deposit date: 2017-02-14 Release date: 2017-05-17 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (4.293 Å) Cite: Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017
5X51	RNA Polymerase II from Komagataella Pastoris (Type-3 crystal) Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... Authors: Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. Deposit date: 2017-02-14 Release date: 2017-05-17 Method: X-RAY DIFFRACTION (6.996 Å) Cite: Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017

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