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7L7Q
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BU of 7l7q by Molmil
Ctf3c with Ulp2-KIM
Descriptor: Inner kinetochore subunit CTF3, Inner kinetochore subunit MCM16, Inner kinetochore subunit MCM22
Authors:Hinshaw, S.M, Harrison, S.C.
Deposit date:2020-12-30
Release date:2021-02-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ctf3/CENP-I provides a docking site for the desumoylase Ulp2 at the kinetochore.
J.Cell Biol., 220, 2021
7RWK
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BU of 7rwk by Molmil
Structure of Cap5 from Asticcacaulis sp.
Descriptor: MAGNESIUM ION, SAVED domain-containing protein, ZINC ION
Authors:Huang, R.H, Fatma, S, Chakravarti, A.
Deposit date:2021-08-20
Release date:2021-11-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Molecular mechanisms of the CdnG-Cap5 antiphage defense system employing 3',2'-cGAMP as the second messenger.
Nat Commun, 12, 2021
7RWM
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BU of 7rwm by Molmil
Structure of Cap5 from Lactococcus lactis
Descriptor: SAVED domain-containing protein, ZINC ION
Authors:Huang, R.H, Fatma, S, Chakravarti, A.
Deposit date:2021-08-20
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Molecular mechanisms of the CdnG-Cap5 antiphage defense system employing 3',2'-cGAMP as the second messenger.
Nat Commun, 12, 2021
1NVQ
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BU of 1nvq by Molmil
The Complex Structure Of Checkpoint Kinase Chk1/UCN-01
Descriptor: 7-HYDROXYSTAUROSPORINE, Peptide ASVSA, SULFATE ION, ...
Authors:Zhao, B, Bower, M.J, McDevitt, P.J, Zhao, H, Davis, S.T, Johanson, K.O, Green, S.M, Concha, N.O, Zhou, B.B.
Deposit date:2003-02-04
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Chk1 Inhibition by UCN-01
J.Biol.Chem., 277, 2002
3EU7
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BU of 3eu7 by Molmil
Crystal Structure of a PALB2 / BRCA2 complex
Descriptor: 19meric peptide from Breast cancer type 2 susceptibility protein, GLYCEROL, Partner and localizer of BRCA2
Authors:Oliver, A.W, Pearl, L.H.
Deposit date:2008-10-09
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for recruitment of BRCA2 by PALB2
Embo Rep., 10, 2009
1XXC
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BU of 1xxc by Molmil
C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR
Descriptor: ARGININE REPRESSOR
Authors:Van Duyne, G.D, Ghosh, G, Maas, W.K, Sigler, P.B.
Deposit date:1995-11-03
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the oligomerization and L-arginine binding domain of the arginine repressor of Escherichia coli.
J.Mol.Biol., 256, 1996
6K19
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BU of 6k19 by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mg
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
4B6C
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BU of 4b6c by Molmil
Structure of the M. smegmatis GyrB ATPase domain in complex with an aminopyrazinamide
Descriptor: 6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide, DNA gyrase subunit B,DNA gyrase subunit B,DNA gyrase subunit B, SODIUM ION
Authors:Tucker, J.A, Shirude, P.S, Madhavapeddi, P, Hussein, S, Basu, R, Ghorpade, S.
Deposit date:2012-08-09
Release date:2013-01-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aminopyrazinamides: novel and specific GyrB inhibitors that kill replicating and nonreplicating Mycobacterium tuberculosis.
ACS Chem. Biol., 8, 2013
6K17
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BU of 6k17 by Molmil
Crystal structure of EXD2 exonuclease domain
Descriptor: Exonuclease 3'-5' domain-containing protein 2, SODIUM ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K1E
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BU of 6k1e by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mg and GMP
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6T2G
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BU of 6t2g by Molmil
NMR structure of KRAS32R G25T conformer G-quadruplex within KRAS promoter region
Descriptor: KRAS32R G25T, POTASSIUM ION
Authors:Marquevielle, J, Salgado, G.
Deposit date:2019-10-08
Release date:2020-02-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of two G-quadruplexes in equilibrium in the KRAS promoter.
Nucleic Acids Res., 48, 2020
3K2P
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BU of 3k2p by Molmil
HIV-1 Reverse Transcriptase Isolated RnaseH Domain with the Inhibitor beta-thujaplicinol Bound at the Active Site
Descriptor: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, MANGANESE (II) ION, Reverse Transcriptase
Authors:Pauly, T.A, Himmel, D.M, Maegley, K, Arnold, E.
Deposit date:2009-09-30
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site.
Structure, 17, 2009
6TZC
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BU of 6tzc by Molmil
Crystal Structure of African Swine Fever Virus A179L with the Autophagy Regulator Beclin
Descriptor: Apoptosis regulator Bcl-2 homolog, Beclin-1, Maltose/maltodextrin-binding periplasmic protein, ...
Authors:Banjara, S, Kvansakul, M, Hinds, M.G.
Deposit date:2019-08-12
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal Structure of African Swine Fever Virus A179L with the Autophagy Regulator Beclin.
Viruses, 11, 2019
1NVS
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BU of 1nvs by Molmil
The Complex Structure Of Checkpoint Kinase Chk1/SB218078
Descriptor: Peptide ASVSA, REL-(9R,12S)-9,10,11,12-TETRAHYDRO-9,12-EPOXY-1H-DIINDOLO[1,2,3-FG:3',2',1'-KL]PYRROLO[3,4-I][1,6]BENZODIAZOCINE-1,3(2H)-DIONE, SULFATE ION, ...
Authors:Zhao, B, Bower, M.J, McDevitt, P.J, Zhao, H, Davis, S.T, Johanson, K.O, Green, S.M, Concha, N.O, Zhou, B.B.
Deposit date:2003-02-04
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Chk1 Inhibition by UCN-01
J.Biol.Chem., 277, 2002
4HEJ
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BU of 4hej by Molmil
Discovery of Selective and Potent Inhibitors of Gram-positive Bacterial Thymidylate Kinase (TMK): Compund 16
Descriptor: 5-methyl-1-[(3S)-1-{3-[3-(trifluoromethyl)phenoxy]benzyl}piperidin-3-yl]pyrimidine-2,4(1H,3H)-dione, Thymidylate kinase
Authors:Martinez-Botella, G, Breen, J, Duffy, J, Dumas, J, Geng, B, Gowers, I, Green, O, Guler, S, Hentemann, M, Hernandez-Juan, F, Joseph-McCarthy, D, Kawatkar, S, Larsen, N, Lazari, O, Loch, J, Macritchie, J.
Deposit date:2012-10-03
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Selective and Potent Inhibitors of Gram-Positive Bacterial Thymidylate Kinase (TMK).
J.Med.Chem., 55, 2012
1XO0
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BU of 1xo0 by Molmil
High resolution structure of the holliday junction intermediate in cre-loxp site-specific recombination
Descriptor: Recombinase CRE, loxP
Authors:Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination.
J.Biol.Chem., 280, 2005
6K1B
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BU of 6k1b by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn and dGMP
Descriptor: Exonuclease 3'-5' domain-containing protein 2, MANGANESE (II) ION
Authors:Park, J, Lee, C.
Deposit date:2019-05-10
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.605 Å)
Cite:The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
4BS2
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BU of 4bs2 by Molmil
NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA
Descriptor: 5'-R(*GP*UP*GP*UP*GP*AP*AP*UP*GP*AP*AP*UP)-3', TAR DNA-BINDING PROTEIN 43
Authors:Lukavsky, P.J, Daujotyte, D, Tollervey, J.R, Ule, J, Stuani, C, Buratti, E, Baralle, F.E, Damberger, F.F, Allain, F.H.T.
Deposit date:2013-06-06
Release date:2013-11-13
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Molecular Basis of Ug-Rich RNA Recognition by the Human Splicing Factor Tdp-43
Nat.Struct.Mol.Biol., 20, 2013
1QAE
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BU of 1qae by Molmil
THE ACTIVE SITE OF SERRATIA ENDONUCLEASE CONTAINS A CONSERVED MAGNESIUM-WATER CLUSTER
Descriptor: MAGNESIUM ION, PROTEIN (EXTRACELLULAR ENDONUCLEASE)
Authors:Miller, M.D, Krause, K.L.
Deposit date:1999-03-03
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The active site of Serratia endonuclease contains a conserved magnesium-water cluster.
J.Mol.Biol., 288, 1999
2Y9Y
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BU of 2y9y by Molmil
Chromatin Remodeling Factor ISW1a(del_ATPase)
Descriptor: IMITATION SWITCH PROTEIN 1 (DEL_ATPASE), ISWI ONE COMPLEX PROTEIN 3
Authors:Yamada, K, Frouws, T.D, Angst, B, Fitzgerald, D.J, DeLuca, C, Schimmele, K, Sargent, D.F, Richmond, T.J.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure and Mechanism of the Chromatin Remodelling Factor Isw1A.
Nature, 472, 2011
6E53
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BU of 6e53 by Molmil
Structure of TERT in complex with a novel telomerase inhibitor
Descriptor: MAGNESIUM ION, RNA/DNA hairpin, Telomerase reverse transcriptase, ...
Authors:Hernandez-Sanchez, W, Huang, W, Plucinsky, B, Garcia-Vazquez, N, Berdis, A.J, Skordalakes, E, Taylor, D.J.
Deposit date:2018-07-19
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A non-natural nucleotide uses a specific pocket to selectively inhibit telomerase activity.
Plos Biol., 17, 2019
8FMF
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BU of 8fmf by Molmil
Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-diAMP ligand (1 tetramer in the AU)
Descriptor: Cyclic (adenosine-(2'-5')-monophosphate-adenosine-(3'-5')-monophosphate, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Rechkoblit, O, Kreitler, D.F, Aggarwal, A.K.
Deposit date:2022-12-23
Release date:2024-02-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Activation of CBASS Cap5 endonuclease immune effector by cyclic nucleotides.
Nat.Struct.Mol.Biol., 31, 2024
8FM1
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BU of 8fm1 by Molmil
Structure of CBASS Cap5 from Pseudomonas syringae in the absence of a ligand (apo form dimer)
Descriptor: SAVED domain-containing protein, ZINC ION
Authors:Rechkoblit, O, Kreitler, D.F, Aggarwal, A.K.
Deposit date:2022-12-22
Release date:2024-02-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Activation of CBASS Cap5 endonuclease immune effector by cyclic nucleotides.
Nat.Struct.Mol.Biol., 31, 2024
8FMG
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BU of 8fmg by Molmil
Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-diAMP ligand (3 tetramers in the AU)
Descriptor: Cyclic (adenosine-(2'-5')-monophosphate-adenosine-(3'-5')-monophosphate, MAGNESIUM ION, SAVED domain-containing protein, ...
Authors:Rechkoblit, O, Kreitler, D.F, Aggarwal, A.K.
Deposit date:2022-12-23
Release date:2024-02-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Activation of CBASS Cap5 endonuclease immune effector by cyclic nucleotides.
Nat.Struct.Mol.Biol., 31, 2024
8FMH
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BU of 8fmh by Molmil
Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-dGAMP ligand (2 tetramers in the AU)
Descriptor: 3'2'-cGAMP, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Rechkoblit, O, Kreitler, D.F, Aggarwal, A.K.
Deposit date:2022-12-23
Release date:2024-02-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Activation of CBASS Cap5 endonuclease immune effector by cyclic nucleotides.
Nat.Struct.Mol.Biol., 31, 2024

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PDB entries from 2024-10-09

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