Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7POQ
DownloadVisualize
BU of 7poq by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with foliosidine in P41212.
Descriptor: 1,2-ETHANEDIOL, BFT-3, CHLORIDE ION, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
4PYH
DownloadVisualize
BU of 4pyh by Molmil
Phospho-glucan bound structure of starch phosphatase Starch EXcess4 reveals the mechanism for C6-specificty
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Meekins, D.A, Vander Kooi, C.W.
Deposit date:2014-03-27
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Phosphoglucan-bound structure of starch phosphatase Starch Excess4 reveals the mechanism for C6 specificity.
Proc.Natl.Acad.Sci.USA, 111, 2014
7NNK
DownloadVisualize
BU of 7nnk by Molmil
Crystal structure of S116A mutant of hydroxy ketone aldolase (SwHKA) from Sphingomonas wittichii RW1 in complex with hydroxypyruvate
Descriptor: 3-HYDROXYPYRUVIC ACID, HpcH/HpaI aldolase, MAGNESIUM ION
Authors:Justo, I, Marsden, S.R, Hanefeld, U, Bento, I.
Deposit date:2021-02-25
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate Induced Movement of the Metal Cofactor between Active and Resting State.
Angew.Chem.Int.Ed.Engl., 61, 2022
4Y0C
DownloadVisualize
BU of 4y0c by Molmil
The structure of Arabidopsis ClpT2
Descriptor: CHLORIDE ION, Clp protease-related protein At4g12060, chloroplastic, ...
Authors:Kimber, M.S, Schultz, L.
Deposit date:2015-02-05
Release date:2015-05-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts.
Plant Cell, 27, 2015
4PZ6
DownloadVisualize
BU of 4pz6 by Molmil
PCE1 guanylyltransferase bound to SER2/SER5 phosphorylated RNA pol II CTD
Descriptor: DNA-directed RNA polymerase II subunit rpb1, GUANOSINE, mRNA-capping enzyme subunit alpha
Authors:Doamekpor, S.K, Lima, C.D.
Deposit date:2014-03-28
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes.
Genes Dev., 28, 2014
7POL
DownloadVisualize
BU of 7pol by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with flumequine
Descriptor: (12~{R})-7-fluoranyl-12-methyl-4-oxidanylidene-1-azatricyclo[7.3.1.0^{5,13}]trideca-2,5(13),6,8-tetraene-3-carboxylic acid, BFT-3, CHLORIDE ION, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7N6C
DownloadVisualize
BU of 7n6c by Molmil
Crystal structure of R22A human Galectin-7 mutant
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-08
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of R20A human Galectin-7 mutant
To Be Published
7POU
DownloadVisualize
BU of 7pou by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with hesperetin.
Descriptor: (2S)-5,7-dihydroxy-2-(3-hydroxy-4-methoxyphenyl)-2,3-dihydro-4H-1-benzopyran-4-one, BFT-3, DIMETHYL SULFOXIDE, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7N96
DownloadVisualize
BU of 7n96 by Molmil
Crystal structure of D103A human Galectin-7 mutant
Descriptor: GLYCEROL, Galectin-7
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-16
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of D103A human Galectin-7 mutant
To Be Published
7N8D
DownloadVisualize
BU of 7n8d by Molmil
Crystal structure of R22A human Galectin-7 mutant in presence of Lactose
Descriptor: 1,2-ETHANEDIOL, Galectin-7, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-14
Release date:2023-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of R22A human Galectin-7 mutant in presence of Lactose
To Be Published
7N57
DownloadVisualize
BU of 7n57 by Molmil
Crystal structure of R20A human Galectin-7 mutant in presence of lactose
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Galectin-7, ...
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-04
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of R20A human Galectin-7 mutant
To Be Published
6PEP
DownloadVisualize
BU of 6pep by Molmil
Focussed refinement of InvGN0N1:SpaPQR:PrgIJ from the Salmonella SPI-1 injectisome needle complex
Descriptor: Protein InvG, Protein PrgH, Protein PrgI, ...
Authors:Hu, J, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2019-06-20
Release date:2019-10-23
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly.
Nat Microbiol, 4, 2019
7SPD
DownloadVisualize
BU of 7spd by Molmil
Crystal Structure of The Tetramerization Domain (29-147) From Human Voltage-gated Potassium Channel Kv2.1 in C 2 2 21 Space Group
Descriptor: DI(HYDROXYETHYL)ETHER, Potassium voltage-gated channel subfamily B member 1, ZINC ION
Authors:Xu, Z, Schnicker, N, Baker, S.
Deposit date:2021-11-02
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Pentameric assembly of the Kv2.1 tetramerization domain.
Acta Crystallogr D Struct Biol, 78, 2022
7N4O
DownloadVisualize
BU of 7n4o by Molmil
Crystal structure of R20A human Galectin-7 mutant
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Galectin-7
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-04
Release date:2023-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of R20A human Galectin-7 mutant
To Be Published
4XWF
DownloadVisualize
BU of 4xwf by Molmil
Crystal structure of the ZMP riboswitch at 1.80 angstrom
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, CACODYLATE ION, IRIDIUM HEXAMMINE ION, ...
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2015-01-28
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.
Chem.Biol., 22, 2015
7N8G
DownloadVisualize
BU of 7n8g by Molmil
Crystal structure of R20A-R22A human Galectin-7 mutant
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2021-06-14
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of R20A human Galectin-7 mutant
To Be Published
6PIG
DownloadVisualize
BU of 6pig by Molmil
V. cholerae TniQ-Cascade complex, closed conformation
Descriptor: RNA (60-MER), TniQ monomer 1, TniQ monomer 2, ...
Authors:Halpin-Healy, T, Klompe, S, Sternberg, S.H.
Deposit date:2019-06-26
Release date:2019-10-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system.
Nature, 577, 2020
4XXO
DownloadVisualize
BU of 4xxo by Molmil
Crystal Structure of Human APOBEC3A
Descriptor: CHLORIDE ION, DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Bohn, M.F, Shandilya, S.M.D, Schiffer, C.A.
Deposit date:2015-01-30
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.843 Å)
Cite:The ssDNA Mutator APOBEC3A Is Regulated by Cooperative Dimerization.
Structure, 23, 2015
7PZP
DownloadVisualize
BU of 7pzp by Molmil
Mitochondrial DNA dependent RNA polymerase homodimer.
Descriptor: DNA-directed RNA polymerase, mitochondrial
Authors:Das, H, Hallberg, B.M.
Deposit date:2021-10-13
Release date:2022-09-28
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Non-coding 7S RNA inhibits transcription via mitochondrial RNA polymerase dimerization.
Cell, 185, 2022
1OQA
DownloadVisualize
BU of 1oqa by Molmil
Solution structure of the BRCT-c domain from human BRCA1
Descriptor: Breast cancer type 1 susceptibility protein
Authors:Gaiser, O.J, Ball, L.J, Schmieder, P, Leitner, D, Strauss, H, Wahl, M, Kuhne, R, Oschkinat, H, Heinemann, U.
Deposit date:2003-03-07
Release date:2004-06-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure, backbone dynamics, and association behavior of the C-terminal BRCT domain from the breast cancer-associated protein BRCA1.
Biochemistry, 43, 2004
7VU9
DownloadVisualize
BU of 7vu9 by Molmil
Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)[GlcNAc(beta1-4)]GlcNAc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lectin (PhoSL)
Authors:Yamasaki, K, Yamasaki, T, Kubota, T.
Deposit date:2021-11-01
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:Core fucose-specific Pholiota squarrosa lectin (PhoSL) as a potent broad-spectrum inhibitor of SARS-CoV-2 infection.
Febs J., 290, 2023
7WGA
DownloadVisualize
BU of 7wga by Molmil
2.2 ANGSTROMS RESOLUTION STRUCTURE ANALYSIS OF TWO REFINED N-ACETYLNEURAMINYLLACTOSE-WHEAT GERM AGGLUTININ ISOLECTIN COMPLEXES
Descriptor: WHEAT GERM LECTIN
Authors:Wright, C.S.
Deposit date:1990-04-03
Release date:1990-10-15
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
J.Mol.Biol., 215, 1990
7WBX
DownloadVisualize
BU of 7wbx by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3) of the nucleosome
Descriptor: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2021-12-17
Release date:2023-07-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
7WBW
DownloadVisualize
BU of 7wbw by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3.5) of the nucleosome
Descriptor: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2021-12-17
Release date:2023-07-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
6YKP
DownloadVisualize
BU of 6ykp by Molmil
Structure of unplugged C. jejuni MotAB
Descriptor: Chemotaxis protein MotA, putative, Chemotaxis protein MotB
Authors:Santiveri, M, Roa-Eguiara, A, Taylor, N.M.I.
Deposit date:2020-04-06
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structure and Function of Stator Units of the Bacterial Flagellar Motor.
Cell, 183, 2020

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon